Cluster: Rep_311_CGC11
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 4
- Substrate:
- Genome ID: Rep_311
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_311_c_12 | Rep_311_c_12_42 | 51800 | 53053 | + | 2.A.1.7.1 |
| STP | Rep_311_c_12 | Rep_311_c_12_43 | 53057 | 53974 | + | PfkB |
| CAZyme | Rep_311_c_12 | Rep_311_c_12_44 | 53946 | 56192 | - | GH92 |
| pfam | Rep_311_c_12 | Rep_311_c_12_45 | 56297 | 57385 | + | HGSNAT_cat |
| TC | Rep_311_c_12 | Rep_311_c_12_46 | 57511 | 57909 | + | 2.A.7.34.3 |
| TC | Rep_311_c_12 | Rep_311_c_12_47 | 58224 | 61253 | + | 1.B.14.6.1 |
| pfam | Rep_311_c_12 | Rep_311_c_12_48 | 61263 | 62927 | + | SusD_RagB | SusD-like_3 |
| NULL(UNKNOWN) | Rep_311_c_12 | Rep_311_c_12_49 | 63017 | 64462 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_311_c_12 | Rep_311_c_12_50 | 64577 | 65905 | + | GH28 |
| CAZyme | Rep_311_c_12 | Rep_311_c_12_51 | 65902 | 69264 | + | GH89 |
| CAZyme | Rep_311_c_12 | Rep_311_c_12_52 | 69350 | 72358 | + | GH95 |
Gene ID: Rep_311_c_12_42
Type: TC
Location: 51800 - 53053 (+)
Type: TC
Location: 51800 - 53053 (+)
Gene ID: Rep_311_c_12_43
Type: STP
Location: 53057 - 53974 (+)
Type: STP
Location: 53057 - 53974 (+)
Gene ID: Rep_311_c_12_44
Type: CAZyme
Location: 53946 - 56192 (-)
Type: CAZyme
Location: 53946 - 56192 (-)
Gene ID: Rep_311_c_12_45
Type: pfam
Location: 56297 - 57385 (+)
Type: pfam
Location: 56297 - 57385 (+)
Gene ID: Rep_311_c_12_46
Type: TC
Location: 57511 - 57909 (+)
Type: TC
Location: 57511 - 57909 (+)
Gene ID: Rep_311_c_12_47
Type: TC
Location: 58224 - 61253 (+)
Type: TC
Location: 58224 - 61253 (+)
Gene ID: Rep_311_c_12_48
Type: pfam
Location: 61263 - 62927 (+)
Type: pfam
Location: 61263 - 62927 (+)
Gene ID: Rep_311_c_12_49
Type:
Location: 63017 - 64462 (+)
Type:
Location: 63017 - 64462 (+)
Gene ID: Rep_311_c_12_50
Type: CAZyme
Location: 64577 - 65905 (+)
Type: CAZyme
Location: 64577 - 65905 (+)
Gene ID: Rep_311_c_12_51
Type: CAZyme
Location: 65902 - 69264 (+)
Type: CAZyme
Location: 65902 - 69264 (+)
Gene ID: Rep_311_c_12_52
Type: CAZyme
Location: 69350 - 72358 (+)
Type: CAZyme
Location: 69350 - 72358 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
Lepagella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.