Cluster: Rep_309_CGC35
🧬 Cluster Details
- Gene Count: 17
- CAZyme Count: 7
- Substrate:
- Genome ID: Rep_309
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_309_c_116 | Rep_309_c_116_23 | 25309 | 26355 | + | GT2 |
| pfam | Rep_309_c_116 | Rep_309_c_116_24 | 26352 | 27032 | + | RadC | UPF0758_N |
| NULL(UNKNOWN) | Rep_309_c_116 | Rep_309_c_116_25 | 27035 | 29221 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_309_c_116 | Rep_309_c_116_26 | 29218 | 31497 | - | GH3 |
| pfam | Rep_309_c_116 | Rep_309_c_116_27 | 31616 | 32908 | - | SusF_SusE | SusF_SusE |
| CAZyme | Rep_309_c_116 | Rep_309_c_116_28 | 32959 | 34389 | - | GH27 |
| pfam | Rep_309_c_116 | Rep_309_c_116_29 | 34403 | 35965 | - | SusF_SusE | SusF_SusE |
| TC | Rep_309_c_116 | Rep_309_c_116_30 | 36027 | 37739 | - | 8.A.46.1.1 |
| TC | Rep_309_c_116 | Rep_309_c_116_31 | 37784 | 41083 | - | 1.B.14.6.1 |
| STP | Rep_309_c_116 | Rep_309_c_116_32 | 41292 | 41882 | + | Sigma70_r2 | Sigma70_r4_2 |
| STP | Rep_309_c_116 | Rep_309_c_116_33 | 41888 | 42907 | + | FecR |
| CAZyme | Rep_309_c_116 | Rep_309_c_116_34 | 42961 | 43950 | + | GH43_34 |
| CAZyme | Rep_309_c_116 | Rep_309_c_116_35 | 44005 | 45189 | - | GH3 |
| sulfatase | Rep_309_c_116 | Rep_309_c_116_36 | 45193 | 46767 | - | S1_14 |
| pfam | Rep_309_c_116 | Rep_309_c_116_37 | 46767 | 48263 | - | Phosphodiest | Metalloenzyme | iPGM_N |
| CAZyme | Rep_309_c_116 | Rep_309_c_116_38 | 48427 | 49272 | + | GT2 |
| CAZyme | Rep_309_c_116 | Rep_309_c_116_39 | 49308 | 50387 | + | GT4 |
Gene ID: Rep_309_c_116_23
Type: CAZyme
Location: 25309 - 26355 (+)
Type: CAZyme
Location: 25309 - 26355 (+)
Gene ID: Rep_309_c_116_24
Type: pfam
Location: 26352 - 27032 (+)
Type: pfam
Location: 26352 - 27032 (+)
Gene ID: Rep_309_c_116_25
Type:
Location: 27035 - 29221 (-)
Type:
Location: 27035 - 29221 (-)
Gene ID: Rep_309_c_116_26
Type: CAZyme
Location: 29218 - 31497 (-)
Type: CAZyme
Location: 29218 - 31497 (-)
Gene ID: Rep_309_c_116_27
Type: pfam
Location: 31616 - 32908 (-)
Type: pfam
Location: 31616 - 32908 (-)
Gene ID: Rep_309_c_116_28
Type: CAZyme
Location: 32959 - 34389 (-)
Type: CAZyme
Location: 32959 - 34389 (-)
Gene ID: Rep_309_c_116_29
Type: pfam
Location: 34403 - 35965 (-)
Type: pfam
Location: 34403 - 35965 (-)
Gene ID: Rep_309_c_116_30
Type: TC
Location: 36027 - 37739 (-)
Type: TC
Location: 36027 - 37739 (-)
Gene ID: Rep_309_c_116_31
Type: TC
Location: 37784 - 41083 (-)
Type: TC
Location: 37784 - 41083 (-)
Gene ID: Rep_309_c_116_32
Type: STP
Location: 41292 - 41882 (+)
Type: STP
Location: 41292 - 41882 (+)
Gene ID: Rep_309_c_116_33
Type: STP
Location: 41888 - 42907 (+)
Type: STP
Location: 41888 - 42907 (+)
Gene ID: Rep_309_c_116_34
Type: CAZyme
Location: 42961 - 43950 (+)
Type: CAZyme
Location: 42961 - 43950 (+)
Gene ID: Rep_309_c_116_35
Type: CAZyme
Location: 44005 - 45189 (-)
Type: CAZyme
Location: 44005 - 45189 (-)
Gene ID: Rep_309_c_116_36
Type: sulfatase
Location: 45193 - 46767 (-)
Type: sulfatase
Location: 45193 - 46767 (-)
Gene ID: Rep_309_c_116_37
Type: pfam
Location: 46767 - 48263 (-)
Type: pfam
Location: 46767 - 48263 (-)
Gene ID: Rep_309_c_116_38
Type: CAZyme
Location: 48427 - 49272 (+)
Type: CAZyme
Location: 48427 - 49272 (+)
Gene ID: Rep_309_c_116_39
Type: CAZyme
Location: 49308 - 50387 (+)
Type: CAZyme
Location: 49308 - 50387 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
Lepagella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.