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PROTEIN: Rep_309_c_116_25

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Protein File & Metadata
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Source:
Rep_309_c_116_25.pdb
Genome ID:
Rep_309
Protein ID:
Rep_309_c_116_25

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Detailed structural information will appear here after analysis...

Protein Sequence 
MMIRNLTLSL   VLLAVSSVAY   SAWDDSKPAH   RFYSVEPGND   STARGIEYTI   ETNRSGNTEI 60
ITLTLRNTRH   TPYQPLKAGL   KLGIDTYMDS   YPEWYGKFFP   TLAVCEPDHF   YGYMQSPEGK 120
VKAVVSADPI   ASWSLDYNMG   YPDWTQENRW   FYGHRIECLN   LDMLCRGPLP   DHNPLLWKLE 180
PGERRSWTVK   IMDLDSLDSF   EEAVCRNTGA   PVLSMERTSC   SPGDSLEIKV   WGSAPRMTVD 240
GNVIGLQKVD   DSLWRGIYRA   TEPGVKYISV   CDGVRQAHGT   VAVRHPWNTT   MRLAREAVER 300
YRQKPTSHVE   SWYGFHTAFD   AARIMPEPGI   DSVINRRFDM   VVDKIFDREK   GAPYKYHWRI 360
QNVSSTIGML   ADRYLAFGNP   ADLDLGERMA   RYVMDCQRED   GAYMNGHTDY   TSVIYPAKSI 420
LEFADAERVA   GRKKQAARIE   ASARRAIDHL   AAADGDLETE   GQITYEDGMI   SCSALQLGEL 480
ALRSKNIKDR   RRYTEAMLRL   LDGHDCLTQL   RVPDGRRRGG   TLRFWEAQYD   VFMLPNMISS 540
PHGWSAWRAY   ATYYAYMLTG   QERWLRETFD   AAAAFAALID   HTTGDLNWAF   VVDPYVRALQ 600
VSEPDTRFTA   DDDTYGNPHP   ELYPNREIII   GEQYVPMIAD   WQTIVSSDND   VHECFKFIAE 660
AVLCNAFIVE   RPDGSFGTYN   CSMVREGDDL   RVTADEPQIR   NLHVNLIHPR   KVVFDGKVTS 720
HQAPVAVR 728
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A175WG55-F1-model_v4 10 728 18 878 0.6623 0.7486
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A516PYA3-F1-model_v4 PL27 18 727 1 640 0.7445 0.8025
AF-A0A5P8M7F3-F1-model_v4 PL27 18 696 9 629 0.7416 0.815
AF-E0S376-F1-model_v4 PL27 18 700 1 593 0.7342 0.8178
A0A416I060 PL27 15 697 1 651 0.7312 0.7825
AF-F5Y9B7-F1-model_v4 PL27 18 701 12 619 0.7288 0.8106
A0A975CYI3 PL27 18 662 9 598 0.7284 0.8191
AF-A0A2S0KVT5-F1-model_v4 PL27 17 680 13 663 0.728 0.7857
AF-A0A6G7YBN3-F1-model_v4 PL27 12 680 18 643 0.7248 0.8001
AF-B7GMZ3-F1-model_v4 PL27 12 681 17 655 0.7223 0.7891
AF-A0A0A7I1G9-F1-model_v4 PL27 12 681 17 655 0.7185 0.7852
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A516PYA3 PL27 18 727 1 640 0.7445 0.8025
A0A5P8M7F3 PL27 18 696 9 629 0.7416 0.815
E0S376 PL27 18 700 1 593 0.7342 0.8178
A0A416I060 PL27 15 697 1 651 0.7312 0.7825
F5Y9B7 PL27 18 701 12 619 0.7288 0.8106
A0A975CYI3 PL27 18 662 9 598 0.7284 0.8191
A0A2S0KVT5 PL27 17 680 13 663 0.728 0.7857
A0A6I5ZZU4 PL27 18 701 27 716 0.7177 0.767
E3QS34 PL27 16 727 17 702 0.7173 0.7578
A0A174T7R5 PL27 16 667 34 690 0.7154 0.7852
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
5nok-assembly2.cif.gz_B 16 665 9 669 0.7194 0.7814
5nok-assembly1.cif.gz_A 16 665 13 668 0.7125 0.7734
Download Full PDB Results
Structural Homologs - SwissProt