Cluster: Rep_309_CGC14
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: Rep_309
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_309_c_28 | Rep_309_c_28_8 | 8590 | 10359 | + | GH5_39 |
| TC | Rep_309_c_28 | Rep_309_c_28_9 | 10368 | 13820 | + | 1.B.14.6.1 |
| pfam | Rep_309_c_28 | Rep_309_c_28_10 | 13832 | 15334 | + | SusD_RagB | SusD-like_3 |
| NULL(UNKNOWN) | Rep_309_c_28 | Rep_309_c_28_11 | 15356 | 17503 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_309_c_28 | Rep_309_c_28_12 | 17488 | 18819 | + | CE7 |
| TF | Rep_309_c_28 | Rep_309_c_28_13 | 18714 | 19403 | - | GerE |
| CAZyme | Rep_309_c_28 | Rep_309_c_28_14 | 19430 | 21643 | + | GH3 |
Gene ID: Rep_309_c_28_8
Type: CAZyme
Location: 8590 - 10359 (+)
Type: CAZyme
Location: 8590 - 10359 (+)
Gene ID: Rep_309_c_28_9
Type: TC
Location: 10368 - 13820 (+)
Type: TC
Location: 10368 - 13820 (+)
Gene ID: Rep_309_c_28_10
Type: pfam
Location: 13832 - 15334 (+)
Type: pfam
Location: 13832 - 15334 (+)
Gene ID: Rep_309_c_28_11
Type:
Location: 15356 - 17503 (+)
Type:
Location: 15356 - 17503 (+)
Gene ID: Rep_309_c_28_12
Type: CAZyme
Location: 17488 - 18819 (+)
Type: CAZyme
Location: 17488 - 18819 (+)
Gene ID: Rep_309_c_28_13
Type: TF
Location: 18714 - 19403 (-)
Type: TF
Location: 18714 - 19403 (-)
Gene ID: Rep_309_c_28_14
Type: CAZyme
Location: 19430 - 21643 (+)
Type: CAZyme
Location: 19430 - 21643 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
Lepagella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.