PROTEIN: Rep_309_c_28_11
Loading protein structure...
Loading protein structure...
Protein File & Metadata
Source:
Rep_309_c_28_11.pdb
Genome ID:
Protein ID:
Rep_309_c_28_11
Loading protein structure information...
Detailed structural information will appear here after analysis...
Protein Sequence
MSTRRILATV LTLSMAAGTV SAHTFYCVEP GGADGKGIQC DITVEKVENR EIVHVVMRNL 60 RHTPFQPVKA GIRLGVDTYM DRYPEWNDKY FPTMMVCEPT HCYGYMQSPS GSVKAIVSDS 120 PVASWSLDYN LGYMEPEPYW FYGHRIKSLN LDLLSTQPQP DRHPQGCREL EAGESREWTL 180 QLIDIDGPDD FEKTVHYAAG VPVPMMSRTS CRPGESVEIT IYGHNPKVKD GPRELPVRAM 240 GHDTWNFVFK KDIPGIYELE INDGDRQTHG YVNVTRPWNE IIRTARREAL RCRQKASSHV 300 ESWYGFHTAF LAARYFPDHE PDSALNARFD MVAAAVFNPE SGRQNRYEWR IQNAFSTVGM 360 LADRYEAYGN KKDLLTAERI ADRVISDSQR ADGAFMNGQT DYSAVIYPAK SLLELADAEY 420 AASRRSRGRK YEKAAQKAID RLVALDGNFN TEGEITYEDG MVSCAALQMG AMALRCKDAD 480 KRRRYRDAML KLLEGHDCLT QLRVADGRRR GGTMRFWEAQ YDVHIQPNMI SSPHGWSAWR 540 AYATYYAWLL TGDEKWLAQT FDAAASFATL VDFDTHRLNW AFVVDPAVNV RQIAVPDSTL 600 TADTPSYGCP HPDMYPHADY TIGERYVPMI SDWQTMVSSD NDVHEVFKFI AEAVLTNAFV 660 VERRDGSLGC YNCSASLEDG VLTVIADEPQ MTNLYVSSDS DYKVKFKGEI ICIER 715
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A175WG55-F1-model_v4 | 6 | 714 | 21 | 895 | 0.6669 |
0.7566 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A5P8M7F3-F1-model_v4 | PL27 | 9 | 688 | 9 | 629 | 0.755 |
0.8229 |
| AF-A0A516PYA3-F1-model_v4 | PL27 | 10 | 713 | 1 | 640 | 0.7547 |
0.807 |
| AF-E0S376-F1-model_v4 | PL27 | 11 | 692 | 1 | 593 | 0.7464 |
0.8253 |
| A0A416I060 | PL27 | 7 | 689 | 2 | 651 | 0.7431 |
0.7895 |
| AF-A0A2S0KVT5-F1-model_v4 | PL27 | 8 | 672 | 12 | 663 | 0.741 |
0.792 |
| A0A975CYI3 | PL27 | 9 | 654 | 9 | 598 | 0.7401 |
0.8258 |
| AF-F5Y9B7-F1-model_v4 | PL27 | 9 | 693 | 12 | 619 | 0.7395 |
0.8159 |
| AF-A0A6G7YBN3-F1-model_v4 | PL27 | 21 | 673 | 23 | 643 | 0.7315 |
0.8067 |
| AF-B7GMZ3-F1-model_v4 | PL27 | 21 | 687 | 23 | 655 | 0.7301 |
0.7979 |
| AF-A0A0P0M2G6-F1-model_v4 | PL27 | 8 | 659 | 34 | 690 | 0.7292 |
0.7937 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A5P8M7F3 | PL27 | 9 | 688 | 9 | 629 | 0.755 |
0.8229 |
| A0A516PYA3 | PL27 | 10 | 713 | 1 | 640 | 0.7547 |
0.807 |
| E0S376 | PL27 | 11 | 692 | 1 | 593 | 0.7464 |
0.8253 |
| A0A416I060 | PL27 | 7 | 689 | 2 | 651 | 0.7431 |
0.7895 |
| A0A2S0KVT5 | PL27 | 8 | 672 | 12 | 663 | 0.741 |
0.792 |
| A0A975CYI3 | PL27 | 9 | 654 | 9 | 598 | 0.7401 |
0.8258 |
| F5Y9B7 | PL27 | 9 | 693 | 12 | 619 | 0.7395 |
0.8159 |
| A0A6I5ZZU4 | PL27 | 9 | 693 | 29 | 716 | 0.729 |
0.7714 |
| E3QS34 | PL27 | 8 | 713 | 17 | 702 | 0.7286 |
0.7631 |
| A0A174T7R5 | PL27 | 8 | 673 | 34 | 690 | 0.7283 |
0.7871 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 5nok-assembly2.cif.gz_B | 8 | 657 | 9 | 669 | 0.7325 |
0.7889 |
| 5nok-assembly1.cif.gz_A | 8 | 657 | 13 | 668 | 0.7258 |
0.7812 |
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.