Cluster: Rep_3085_CGC9
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_3085
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3085_c_8 | Rep_3085_c_8_32 | 37470 | 39875 | + | GT35 |
| CAZyme | Rep_3085_c_8 | Rep_3085_c_8_33 | 39948 | 41804 | + | GH13_39 |
| pfam | Rep_3085_c_8 | Rep_3085_c_8_34 | 41950 | 42399 | + | NfeD |
| TC | Rep_3085_c_8 | Rep_3085_c_8_35 | 42448 | 43353 | + | 8.A.21.2.2 |
Gene ID: Rep_3085_c_8_32
Type: CAZyme
Location: 37470 - 39875 (+)
Type: CAZyme
Location: 37470 - 39875 (+)
Gene ID: Rep_3085_c_8_33
Type: CAZyme
Location: 39948 - 41804 (+)
Type: CAZyme
Location: 39948 - 41804 (+)
Gene ID: Rep_3085_c_8_34
Type: pfam
Location: 41950 - 42399 (+)
Type: pfam
Location: 41950 - 42399 (+)
Gene ID: Rep_3085_c_8_35
Type: TC
Location: 42448 - 43353 (+)
Type: TC
Location: 42448 - 43353 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecalibacterium
Species
Faecalibacterium prausnitzii_F
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.