Cluster: Rep_3085_CGC28
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3085
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3085_c_46 | Rep_3085_c_46_3 | 2113 | 3708 | - | GT4 |
| NULL(UNKNOWN) | Rep_3085_c_46 | Rep_3085_c_46_4 | 3734 | 4525 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | Rep_3085_c_46 | Rep_3085_c_46_5 | 4585 | 5703 | - | Acyl_transf_3 |
| TC | Rep_3085_c_46 | Rep_3085_c_46_6 | 6099 | 7352 | + | 4.C.1.1.4 |
Gene ID: Rep_3085_c_46_3
Type: CAZyme
Location: 2113 - 3708 (-)
Type: CAZyme
Location: 2113 - 3708 (-)
Gene ID: Rep_3085_c_46_4
Type:
Location: 3734 - 4525 (-)
Type:
Location: 3734 - 4525 (-)
Gene ID: Rep_3085_c_46_5
Type: pfam
Location: 4585 - 5703 (-)
Type: pfam
Location: 4585 - 5703 (-)
Gene ID: Rep_3085_c_46_6
Type: TC
Location: 6099 - 7352 (+)
Type: TC
Location: 6099 - 7352 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecalibacterium
Species
Faecalibacterium prausnitzii_F
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.