Cluster: Rep_3050_CGC9
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_3050
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3050_c_0 | Rep_3050_c_0_519 | 583750 | 585048 | - | GH136 |
| NULL(UNKNOWN) | Rep_3050_c_0 | Rep_3050_c_0_520 | 585014 | 585466 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_3050_c_0 | Rep_3050_c_0_521 | 585463 | 586269 | - | 3.A.1.1.4 |
| TC | Rep_3050_c_0 | Rep_3050_c_0_522 | 586262 | 587146 | - | 3.A.1.1.4 |
| TC | Rep_3050_c_0 | Rep_3050_c_0_523 | 587282 | 588640 | - | 3.A.1.1.4 |
| CAZyme | Rep_3050_c_0 | Rep_3050_c_0_524 | 588722 | 590887 | - | GH112 |
Gene ID: Rep_3050_c_0_519
Type: CAZyme
Location: 583750 - 585048 (-)
Type: CAZyme
Location: 583750 - 585048 (-)
Gene ID: Rep_3050_c_0_520
Type:
Location: 585014 - 585466 (-)
Type:
Location: 585014 - 585466 (-)
Gene ID: Rep_3050_c_0_521
Type: TC
Location: 585463 - 586269 (-)
Type: TC
Location: 585463 - 586269 (-)
Gene ID: Rep_3050_c_0_522
Type: TC
Location: 586262 - 587146 (-)
Type: TC
Location: 586262 - 587146 (-)
Gene ID: Rep_3050_c_0_523
Type: TC
Location: 587282 - 588640 (-)
Type: TC
Location: 587282 - 588640 (-)
Gene ID: Rep_3050_c_0_524
Type: CAZyme
Location: 588722 - 590887 (-)
Type: CAZyme
Location: 588722 - 590887 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger
Species
Gemmiger sp900539695
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.