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Cluster: Rep_3050_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_3050_c_0 Rep_3050_c_0_419 476968 478875 - 8.A.59.2.1
TC Rep_3050_c_0 Rep_3050_c_0_420 479067 479960 + 3.A.1.1.45
TC Rep_3050_c_0 Rep_3050_c_0_421 479960 480790 + 3.A.1.1.45
STP Rep_3050_c_0 Rep_3050_c_0_422 480860 482197 + SBP_bac_1
STP Rep_3050_c_0 Rep_3050_c_0_423 482628 483683 + Peripla_BP_1
TC Rep_3050_c_0 Rep_3050_c_0_424 483755 485266 + 3.A.1.2.20
TC Rep_3050_c_0 Rep_3050_c_0_425 485272 486258 + 3.A.1.2.15
CAZyme Rep_3050_c_0 Rep_3050_c_0_426 486273 487967 + GH3
Gene ID: Rep_3050_c_0_419
Type: TC
Location: 476968 - 478875 (-)
Gene ID: Rep_3050_c_0_420
Type: TC
Location: 479067 - 479960 (+)
Gene ID: Rep_3050_c_0_421
Type: TC
Location: 479960 - 480790 (+)
Gene ID: Rep_3050_c_0_422
Type: STP
Location: 480860 - 482197 (+)
Gene ID: Rep_3050_c_0_423
Type: STP
Location: 482628 - 483683 (+)
Gene ID: Rep_3050_c_0_424
Type: TC
Location: 483755 - 485266 (+)
Gene ID: Rep_3050_c_0_425
Type: TC
Location: 485272 - 486258 (+)
Gene ID: Rep_3050_c_0_426
Type: CAZyme
Location: 486273 - 487967 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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