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Cluster: Rep_3050_CGC40

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_3050_c_3 Rep_3050_c_3_114 119839 121023 + 2.A.1.65.8
STP Rep_3050_c_3 Rep_3050_c_3_115 121080 122387 + SBP_bac_1
TC Rep_3050_c_3 Rep_3050_c_3_116 122506 123375 + 3.A.1.1.20
TC Rep_3050_c_3 Rep_3050_c_3_117 123389 124255 + 3.A.1.1.47
CAZyme Rep_3050_c_3 Rep_3050_c_3_118 124270 126012 + GH9
Gene ID: Rep_3050_c_3_114
Type: TC
Location: 119839 - 121023 (+)
Gene ID: Rep_3050_c_3_115
Type: STP
Location: 121080 - 122387 (+)
Gene ID: Rep_3050_c_3_116
Type: TC
Location: 122506 - 123375 (+)
Gene ID: Rep_3050_c_3_117
Type: TC
Location: 123389 - 124255 (+)
Gene ID: Rep_3050_c_3_118
Type: CAZyme
Location: 124270 - 126012 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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