Cluster: Rep_3050_CGC36
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 3
- Substrate:
- Genome ID: Rep_3050
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3050_c_1 | Rep_3050_c_1_1518 | 1683555 | 1684586 | - | GT2 |
| pfam | Rep_3050_c_1 | Rep_3050_c_1_1519 | 1684611 | 1686341 | - | Hydrolase |
| CAZyme | Rep_3050_c_1 | Rep_3050_c_1_1520 | 1686338 | 1687231 | - | GT2 |
| CAZyme | Rep_3050_c_1 | Rep_3050_c_1_1521 | 1687224 | 1687994 | - | GT111 |
| TC | Rep_3050_c_1 | Rep_3050_c_1_1522 | 1688179 | 1690068 | - | 3.A.1.121.4 |
Gene ID: Rep_3050_c_1_1518
Type: CAZyme
Location: 1683555 - 1684586 (-)
Type: CAZyme
Location: 1683555 - 1684586 (-)
Gene ID: Rep_3050_c_1_1519
Type: pfam
Location: 1684611 - 1686341 (-)
Type: pfam
Location: 1684611 - 1686341 (-)
Gene ID: Rep_3050_c_1_1520
Type: CAZyme
Location: 1686338 - 1687231 (-)
Type: CAZyme
Location: 1686338 - 1687231 (-)
Gene ID: Rep_3050_c_1_1521
Type: CAZyme
Location: 1687224 - 1687994 (-)
Type: CAZyme
Location: 1687224 - 1687994 (-)
Gene ID: Rep_3050_c_1_1522
Type: TC
Location: 1688179 - 1690068 (-)
Type: TC
Location: 1688179 - 1690068 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger
Species
Gemmiger sp900539695
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.