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Cluster: Rep_3050_CGC31

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_3050_c_1 Rep_3050_c_1_1046 1192221 1193942 + 9.B.33.1.1
STP Rep_3050_c_1 Rep_3050_c_1_1047 1193926 1194573 + Peripla_BP_1
pfam Rep_3050_c_1 Rep_3050_c_1_1048 1194554 1194898 + Peripla_BP_4
TC Rep_3050_c_1 Rep_3050_c_1_1049 1195181 1196239 + 3.A.1.2.3
TC Rep_3050_c_1 Rep_3050_c_1_1050 1196348 1197856 + 3.A.1.2.3
TC Rep_3050_c_1 Rep_3050_c_1_1051 1197943 1198854 + 3.A.1.2.3
NULL(UNKNOWN) Rep_3050_c_1 Rep_3050_c_1_1052 1198861 1199082 + NULL(UNKNOWN)
[View Structural Homologs]
pfam Rep_3050_c_1 Rep_3050_c_1_1053 1199197 1199775 - Flavin_Reduct
CAZyme Rep_3050_c_1 Rep_3050_c_1_1054 1199772 1200758 - GT2
Gene ID: Rep_3050_c_1_1046
Type: TC
Location: 1192221 - 1193942 (+)
Gene ID: Rep_3050_c_1_1047
Type: STP
Location: 1193926 - 1194573 (+)
Gene ID: Rep_3050_c_1_1048
Type: pfam
Location: 1194554 - 1194898 (+)
Gene ID: Rep_3050_c_1_1049
Type: TC
Location: 1195181 - 1196239 (+)
Gene ID: Rep_3050_c_1_1050
Type: TC
Location: 1196348 - 1197856 (+)
Gene ID: Rep_3050_c_1_1051
Type: TC
Location: 1197943 - 1198854 (+)
Gene ID: Rep_3050_c_1_1052
Type:
Location: 1198861 - 1199082 (+)
Gene ID: Rep_3050_c_1_1053
Type: pfam
Location: 1199197 - 1199775 (-)
Gene ID: Rep_3050_c_1_1054
Type: CAZyme
Location: 1199772 - 1200758 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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