Cluster: Rep_3050_CGC18
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3050
- CGC Family ID: CGCFAM_00424
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3050_c_1 | Rep_3050_c_1_489 | 555950 | 556879 | + | GT2 |
| pfam | Rep_3050_c_1 | Rep_3050_c_1_490 | 557343 | 557705 | + | EamA |
| NULL(UNKNOWN) | Rep_3050_c_1 | Rep_3050_c_1_491 | 557702 | 557806 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_3050_c_1 | Rep_3050_c_1_492 | 557838 | 558050 | + | 2.A.7.33.5 |
Gene ID: Rep_3050_c_1_489
Type: CAZyme
Location: 555950 - 556879 (+)
Type: CAZyme
Location: 555950 - 556879 (+)
Gene ID: Rep_3050_c_1_490
Type: pfam
Location: 557343 - 557705 (+)
Type: pfam
Location: 557343 - 557705 (+)
Gene ID: Rep_3050_c_1_491
Type:
Location: 557702 - 557806 (+)
Type:
Location: 557702 - 557806 (+)
Gene ID: Rep_3050_c_1_492
Type: TC
Location: 557838 - 558050 (+)
Type: TC
Location: 557838 - 558050 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger
Species
Gemmiger sp900539695
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.