Cluster: Rep_3050_CGC15
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3050
- CGC Family ID: CGCFAM_05590
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3050_c_1 | Rep_3050_c_1_149 | 168184 | 169596 | + | 3.A.1.1.27 |
| TC | Rep_3050_c_1 | Rep_3050_c_1_150 | 169593 | 170492 | + | 3.A.1.1.27 |
| peptidase | Rep_3050_c_1 | Rep_3050_c_1_151 | 170748 | 172238 | - | M32.UPW |
| CAZyme | Rep_3050_c_1 | Rep_3050_c_1_152 | 172364 | 173209 | + | GT2 |
Gene ID: Rep_3050_c_1_149
Type: TC
Location: 168184 - 169596 (+)
Type: TC
Location: 168184 - 169596 (+)
Gene ID: Rep_3050_c_1_150
Type: TC
Location: 169593 - 170492 (+)
Type: TC
Location: 169593 - 170492 (+)
Gene ID: Rep_3050_c_1_151
Type: peptidase
Location: 170748 - 172238 (-)
Type: peptidase
Location: 170748 - 172238 (-)
Gene ID: Rep_3050_c_1_152
Type: CAZyme
Location: 172364 - 173209 (+)
Type: CAZyme
Location: 172364 - 173209 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger
Species
Gemmiger sp900539695
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.