Cluster: Rep_3050_CGC12
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3050
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3050_c_0 | Rep_3050_c_0_712 | 787075 | 787815 | - | 3.A.1.3.20 |
| TC | Rep_3050_c_0 | Rep_3050_c_0_713 | 787808 | 788632 | - | 3.A.1.3.20 |
| TC | Rep_3050_c_0 | Rep_3050_c_0_714 | 788725 | 789633 | - | 3.A.1.3.20 |
| TC | Rep_3050_c_0 | Rep_3050_c_0_715 | 789864 | 791603 | - | 2.A.114.1.3 |
| CAZyme | Rep_3050_c_0 | Rep_3050_c_0_716 | 791878 | 793446 | + | GH13_44 |
Gene ID: Rep_3050_c_0_712
Type: TC
Location: 787075 - 787815 (-)
Type: TC
Location: 787075 - 787815 (-)
Gene ID: Rep_3050_c_0_713
Type: TC
Location: 787808 - 788632 (-)
Type: TC
Location: 787808 - 788632 (-)
Gene ID: Rep_3050_c_0_714
Type: TC
Location: 788725 - 789633 (-)
Type: TC
Location: 788725 - 789633 (-)
Gene ID: Rep_3050_c_0_715
Type: TC
Location: 789864 - 791603 (-)
Type: TC
Location: 789864 - 791603 (-)
Gene ID: Rep_3050_c_0_716
Type: CAZyme
Location: 791878 - 793446 (+)
Type: CAZyme
Location: 791878 - 793446 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger
Species
Gemmiger sp900539695
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.