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Cluster: Rep_304_CGC30

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_304_c_76 Rep_304_c_76_4 2286 3257 - 2.A.4.7.2
NULL(UNKNOWN) Rep_304_c_76 Rep_304_c_76_5 3605 4546 + NULL(UNKNOWN)
[View Structural Homologs]
pfam Rep_304_c_76 Rep_304_c_76_6 4591 5661 + Metallophos
CAZyme Rep_304_c_76 Rep_304_c_76_7 5799 7214 - CE20
STP Rep_304_c_76 Rep_304_c_76_8 7383 8411 + FecR
CAZyme Rep_304_c_76 Rep_304_c_76_9 8462 10204 + GH5_39
TC Rep_304_c_76 Rep_304_c_76_10 10215 13682 + 1.B.14.6.1
TC Rep_304_c_76 Rep_304_c_76_11 13702 15198 + 8.A.46.1.4
NULL(UNKNOWN) Rep_304_c_76 Rep_304_c_76_12 15277 17415 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_304_c_76 Rep_304_c_76_13 17412 19583 + GH3
Gene ID: Rep_304_c_76_4
Type: TC
Location: 2286 - 3257 (-)
Gene ID: Rep_304_c_76_5
Type:
Location: 3605 - 4546 (+)
Gene ID: Rep_304_c_76_6
Type: pfam
Location: 4591 - 5661 (+)
Gene ID: Rep_304_c_76_7
Type: CAZyme
Location: 5799 - 7214 (-)
Gene ID: Rep_304_c_76_8
Type: STP
Location: 7383 - 8411 (+)
Gene ID: Rep_304_c_76_9
Type: CAZyme
Location: 8462 - 10204 (+)
Gene ID: Rep_304_c_76_10
Type: TC
Location: 10215 - 13682 (+)
Gene ID: Rep_304_c_76_11
Type: TC
Location: 13702 - 15198 (+)
Gene ID: Rep_304_c_76_12
Type:
Location: 15277 - 17415 (+)
Gene ID: Rep_304_c_76_13
Type: CAZyme
Location: 17412 - 19583 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Muribaculaceae
→
Genus
Lepagella
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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