PROTEIN: Rep_304_c_76_12
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Protein File & Metadata
Source:
Rep_304_c_76_12.pdb
Genome ID:
Protein ID:
Rep_304_c_76_12
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Detailed structural information will appear here after analysis...
Protein Sequence
MKPLLSIIIL LTASLAAYSA EHRFYADEGA GDDFSPQDVV CMIRSSIDGD VENVRVTIKN 60 NRHTPFQPVK AGILLGIDTY MARYPDWNDK YFPTLMVCEP CHFYGYMQSP SGKIKAIASP 120 DPVASWSLDY NLGYQDPVPH WFMGHRIKSL RLDLLAALPL PAHHPQNQWQ LMPGEERSWT 180 IKIIDIPALA DFEATVSREC GVPMLHMETT STAPGNEIRF DIYGTAPSVT VNRQPVPVKK 240 SDDRWQACFS SSIPGIYDIE VIDGNKKAHG HINVRYPWRR TMELAREAAW RYKQKATSHV 300 ESWYGFHTAF LAARYFPCDS IDSLLNNRFD TIFNELFDSE GNQKKYDWRI QNVSSTVGML 360 VDRYEAYGDK ADLMKARLLA DRFISSFQQN DGAYRTGNTV YTSVIYPAKS ILELADAEWK 420 AGLRNDARRH ERSARMAIDR LVESKGDFET EGEITYEDGM VSCSALQIGM LALRQKDNRL 480 RRHYTDEMLE ILKGHDCLTQ LRVPDGRRRG GTMRYWEAQY DVHMLPNMIS SPHGWSAWRA 540 YATYYAYLLT GDERWIKETF DAASSFASLI DPLSGRLRWA FVVDPQLHVR QIAVPDSAHT 600 SETPSYGTPH PDVYGNRKFT IGEQYVDMIS DWQTVVSSDN DVHEVFKFIA EAVLDKAYVV 660 ERPDGSLGCY NCKAVRNGNN IEVYASEPQI CHLFVNTKGK YNVKFDGEII WQ 712
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A175WG55-F1-model_v4 | 4 | 712 | 22 | 858 | 0.6743 |
0.763 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A5P8M7F3-F1-model_v4 | PL27 | 6 | 687 | 9 | 629 | 0.7578 |
0.8242 |
| AF-A0A516PYA3-F1-model_v4 | PL27 | 6 | 710 | 1 | 640 | 0.7573 |
0.808 |
| AF-E0S376-F1-model_v4 | PL27 | 7 | 691 | 1 | 593 | 0.7491 |
0.8265 |
| A0A416I060 | PL27 | 5 | 688 | 3 | 651 | 0.7484 |
0.7944 |
| AF-F5Y9B7-F1-model_v4 | PL27 | 9 | 694 | 1 | 619 | 0.7444 |
0.8058 |
| AF-A0A2S0KVT5-F1-model_v4 | PL27 | 6 | 671 | 13 | 663 | 0.7427 |
0.7933 |
| A0A975CYI3 | PL27 | 6 | 653 | 9 | 598 | 0.7418 |
0.826 |
| AF-A0A6G7YBN3-F1-model_v4 | PL27 | 17 | 672 | 8 | 643 | 0.7382 |
0.7946 |
| AF-A0A6I5ZZU4-F1-model_v4 | PL27 | 2 | 708 | 24 | 717 | 0.7374 |
0.7694 |
| AF-B7GMZ3-F1-model_v4 | PL27 | 16 | 686 | 7 | 655 | 0.7352 |
0.7833 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A5P8M7F3 | PL27 | 6 | 687 | 9 | 629 | 0.7578 |
0.8242 |
| A0A516PYA3 | PL27 | 6 | 710 | 1 | 640 | 0.7573 |
0.808 |
| E0S376 | PL27 | 7 | 691 | 1 | 593 | 0.7491 |
0.8265 |
| A0A416I060 | PL27 | 5 | 688 | 3 | 651 | 0.7484 |
0.7944 |
| F5Y9B7 | PL27 | 9 | 694 | 1 | 619 | 0.7444 |
0.8058 |
| A0A2S0KVT5 | PL27 | 6 | 671 | 13 | 663 | 0.7427 |
0.7933 |
| A0A975CYI3 | PL27 | 6 | 653 | 9 | 598 | 0.7418 |
0.826 |
| A0A6I5ZZU4 | PL27 | 2 | 708 | 24 | 717 | 0.7374 |
0.7694 |
| E3QS34 | PL27 | 6 | 712 | 1 | 700 | 0.7349 |
0.7533 |
| A0A174T7R5 | PL27 | 5 | 672 | 35 | 690 | 0.7313 |
0.7898 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 5nok-assembly2.cif.gz_B | 5 | 656 | 9 | 669 | 0.734 |
0.7865 |
| 5nok-assembly1.cif.gz_A | 6 | 656 | 14 | 668 | 0.7275 |
0.7801 |
| 3h7l-assembly1.cif.gz_A | 100 | 704 | 1 | 576 | 0.5007 |
0.5647 |
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.