Cluster: Rep_304_CGC14
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: Rep_304
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_304_c_52 | Rep_304_c_52_17 | 19617 | 21380 | + | GH5_39 |
| TC | Rep_304_c_52 | Rep_304_c_52_18 | 21389 | 24841 | + | 1.B.14.6.1 |
| pfam | Rep_304_c_52 | Rep_304_c_52_19 | 24871 | 26373 | + | SusD_RagB | SusD-like_3 |
| NULL(UNKNOWN) | Rep_304_c_52 | Rep_304_c_52_20 | 26395 | 28542 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_304_c_52 | Rep_304_c_52_21 | 28527 | 29858 | + | CE7 |
| TF | Rep_304_c_52 | Rep_304_c_52_22 | 29753 | 30442 | - | GerE |
| CAZyme | Rep_304_c_52 | Rep_304_c_52_23 | 30469 | 32670 | + | GH3 |
Gene ID: Rep_304_c_52_17
Type: CAZyme
Location: 19617 - 21380 (+)
Type: CAZyme
Location: 19617 - 21380 (+)
Gene ID: Rep_304_c_52_18
Type: TC
Location: 21389 - 24841 (+)
Type: TC
Location: 21389 - 24841 (+)
Gene ID: Rep_304_c_52_19
Type: pfam
Location: 24871 - 26373 (+)
Type: pfam
Location: 24871 - 26373 (+)
Gene ID: Rep_304_c_52_20
Type:
Location: 26395 - 28542 (+)
Type:
Location: 26395 - 28542 (+)
Gene ID: Rep_304_c_52_21
Type: CAZyme
Location: 28527 - 29858 (+)
Type: CAZyme
Location: 28527 - 29858 (+)
Gene ID: Rep_304_c_52_22
Type: TF
Location: 29753 - 30442 (-)
Type: TF
Location: 29753 - 30442 (-)
Gene ID: Rep_304_c_52_23
Type: CAZyme
Location: 30469 - 32670 (+)
Type: CAZyme
Location: 30469 - 32670 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
Lepagella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.