PROTEIN: Rep_304_c_52_20
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Protein File & Metadata
Source:
Rep_304_c_52_20.pdb
Genome ID:
Protein ID:
Rep_304_c_52_20
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Protein Sequence
MSTRRILATV LALSVAAGTM SAHTFYCVES DGADGKGIQC DITVEKVENR EIVHVVMRNL 60 RHTPFQPVKA GIRLGVDTYM DRYPEWNDKY FPTMMVCEPT HCYGYMQSPS GKVKAIVSDS 120 PVASWSLDYN LGYMEPEPYW FYGHRIKSLN LDLLSTQPQP DHHPRGCREL GAGESREWTL 180 QLIDIDGPDD FEKTVHYTAG LPVPMMSRTS CRPGEPIEIT IYGHNPKVKY GSRELPVRAV 240 GHDTWNFVFR QDNPGIYEME INDGDWQTHG YVNVTRPWNE IIRTARREAL RCRQKATSHV 300 ESWYGFHTAF LAARYFPDHE PDSALNARFD MVAAAVFNPE SGRQNRYEWR IQNAFSTVGM 360 LADRYEAYGN KKDLLTAERI ADRVISDSQR ADGAFMNGQT DYSAVIYPAK SLLELADAEY 420 SASRRSRGRK YEKAAQKAID RLVALDGNFN TEGEITYEDG MVSCAALQMG AMALRCKDAD 480 KRKRYRDAML KLLEGHDCLT QLRVSDGRRR GGTMRFWEAQ YDVHVQPNMI SSPHGWSAWR 540 AYATYYAWLL TGDEKWLAQT FDAAASFAAL VDFDTHRLNW AFVVDPAVNV RQIAVPDSTL 600 TADTPSYGCP HPDMYPHADY TIGERYVPMI SDWQTMVSSD NDVHEVFKFI AEAVLTNAFV 660 VERRDGSLGC YNCSASLEDG VLTVIADEPQ MTNLYISSDS DFKVKFKGEV ICIER 715
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A175WG55-F1-model_v4 | 5 | 715 | 18 | 895 | 0.6722 |
0.7604 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A5P8M7F3-F1-model_v4 | PL27 | 12 | 688 | 8 | 629 | 0.7539 |
0.8202 |
| AF-A0A516PYA3-F1-model_v4 | PL27 | 12 | 713 | 1 | 640 | 0.7535 |
0.8055 |
| AF-E0S376-F1-model_v4 | PL27 | 11 | 692 | 1 | 593 | 0.7438 |
0.8218 |
| A0A416I060 | PL27 | 10 | 689 | 3 | 651 | 0.7409 |
0.7881 |
| AF-A0A2S0KVT5-F1-model_v4 | PL27 | 10 | 672 | 12 | 663 | 0.7395 |
0.79 |
| A0A975CYI3 | PL27 | 10 | 654 | 8 | 598 | 0.7379 |
0.8218 |
| AF-F5Y9B7-F1-model_v4 | PL27 | 12 | 695 | 12 | 619 | 0.7375 |
0.8135 |
| AF-A0A6G7YBN3-F1-model_v4 | PL27 | 8 | 673 | 19 | 643 | 0.7337 |
0.8045 |
| AF-B7GMZ3-F1-model_v4 | PL27 | 8 | 687 | 19 | 655 | 0.7326 |
0.7959 |
| AF-A0A0A7I1G9-F1-model_v4 | PL27 | 8 | 673 | 19 | 655 | 0.7289 |
0.7922 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A5P8M7F3 | PL27 | 12 | 688 | 8 | 629 | 0.7539 |
0.8202 |
| A0A516PYA3 | PL27 | 12 | 713 | 1 | 640 | 0.7535 |
0.8055 |
| E0S376 | PL27 | 11 | 692 | 1 | 593 | 0.7438 |
0.8218 |
| A0A416I060 | PL27 | 10 | 689 | 3 | 651 | 0.7409 |
0.7881 |
| A0A2S0KVT5 | PL27 | 10 | 672 | 12 | 663 | 0.7395 |
0.79 |
| A0A975CYI3 | PL27 | 10 | 654 | 8 | 598 | 0.7379 |
0.8218 |
| F5Y9B7 | PL27 | 12 | 695 | 12 | 619 | 0.7375 |
0.8135 |
| E3QS34 | PL27 | 10 | 713 | 1 | 702 | 0.7282 |
0.746 |
| A0A6I5ZZU4 | PL27 | 12 | 693 | 29 | 716 | 0.7279 |
0.7733 |
| A0A174T7R5 | PL27 | 10 | 673 | 34 | 690 | 0.7263 |
0.7846 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 5nok-assembly2.cif.gz_B | 10 | 657 | 9 | 669 | 0.73 |
0.7881 |
| 5nok-assembly1.cif.gz_A | 10 | 657 | 13 | 668 | 0.7238 |
0.781 |
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.