Cluster: Rep_3027_CGC24
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3027
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3027_c_104 | Rep_3027_c_104_4 | 4153 | 4854 | - | 3.A.1.122.14 |
| pfam | Rep_3027_c_104 | Rep_3027_c_104_5 | 5060 | 6814 | - | Big_2 | Big_2 | Big_2 | Big_2 | Big_2 | HL_N-beta |
| NULL(UNKNOWN) | Rep_3027_c_104 | Rep_3027_c_104_6 | 6833 | 8164 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_3027_c_104 | Rep_3027_c_104_7 | 8188 | 9456 | - | GT4 |
Gene ID: Rep_3027_c_104_4
Type: TC
Location: 4153 - 4854 (-)
Type: TC
Location: 4153 - 4854 (-)
Gene ID: Rep_3027_c_104_5
Type: pfam
Location: 5060 - 6814 (-)
Type: pfam
Location: 5060 - 6814 (-)
Gene ID: Rep_3027_c_104_6
Type:
Location: 6833 - 8164 (-)
Type:
Location: 6833 - 8164 (-)
Gene ID: Rep_3027_c_104_7
Type: CAZyme
Location: 8188 - 9456 (-)
Type: CAZyme
Location: 8188 - 9456 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Aristaeellaceae
Genus
Limiplasma
Species
Limiplasma sp022769795
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.