PROTEIN: Rep_3027_c_104_6
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Protein File & Metadata
Source:
Rep_3027_c_104_6.pdb
Genome ID:
Protein ID:
Rep_3027_c_104_6
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Protein Sequence
MAQSPKRILI VSYYFGPQNA IGAVRPTKLA KYLARMGHEV TVICGIGMTG LKDPTLERDM 60 RELKDVHVVR EWNPLRAWKA RKREQAAPSD ASKPAAAPKE EAPKTPSLLH RAADAAYLYL 120 WWLADRSFAH RAVRELRRLK GPYDAVFSSY APFSVHEIAR EAKRRGIARK WIADFRDEVN 180 LSFGWQAGRK ARYMRMLRRE ADVLTAVSQG FLEMMDFQNV GRVLSNGYDR EDLPAASAPM 240 EHDRLRVVYC GLLSMARKNV PDRDLTPMFR ALRALVDEGA LPLERLTLVY AGSEGALFRS 300 QAARCGLEGC VEDHGLVRRD ESIRLQQSAD ILLMASWHTQ AQRGILTGKL FEYMMMDKPI 360 VCCMGGDAPG SGVKRVLQET GMGVCCEAAC AQADEAALKR YLAQAAERWK NGAPLLAAKR 420 QAEVDGYAYP ELARALAEWM DEA 443
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-C6TI07-F1-model_v4 | 1 | 443 | 3 | 404 | 0.7536 |
0.8117 |
| AF-F4IBV4-F1-model_v4 | 1 | 443 | 3 | 399 | 0.7502 |
0.8141 |
| AF-A0A1D6E1K2-F1-model_v4 | 1 | 443 | 14 | 414 | 0.7474 |
0.8158 |
| AF-Q7XLZ9-F1-model_v4 | 1 | 443 | 15 | 415 | 0.7408 |
0.8101 |
| AF-X8F781-F1-model_v4 | 5 | 443 | 1 | 383 | 0.7354 |
0.8095 |
| AF-K0EXF1-F1-model_v4 | 5 | 441 | 1 | 375 | 0.7335 |
0.8123 |
| AF-A0A0R0GUJ0-F1-model_v4 | 1 | 443 | 4 | 428 | 0.7334 |
0.7701 |
| AF-A0A0H5RZC5-F1-model_v4 | 6 | 443 | 1 | 402 | 0.733 |
0.7909 |
| AF-P9WMZ3-F1-model_v4 | 5 | 443 | 1 | 384 | 0.7328 |
0.8041 |
| AF-Q2G1J7-F1-model_v4 | 3 | 441 | 1 | 401 | 0.7312 |
0.7866 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A807N870 | GT4 | 6 | 443 | 1 | 439 | 0.8531 |
0.8751 |
| AF-A0A807N870-F1-model_v4 | GT4 | 6 | 443 | 1 | 439 | 0.8531 |
0.8751 |
| AF-A0A345UNA4-F1-model_v4 | GT4 | 5 | 443 | 1 | 436 | 0.8336 |
0.8594 |
| AF-A0A142L2D3-F1-model_v4 | GT4 | 5 | 443 | 1 | 435 | 0.8327 |
0.8575 |
| AF-L7W9F4-F1-model_v4 | GT4 | 4 | 443 | 1 | 431 | 0.8325 |
0.8601 |
| AF-A0A345H573-F1-model_v4 | GT4 | 4 | 443 | 1 | 427 | 0.8308 |
0.8641 |
| AF-A0A5P2G7A4-F1-model_v4 | GT4 | 5 | 443 | 1 | 430 | 0.8305 |
0.8588 |
| AF-A0A2Z4LVN3-F1-model_v4 | GT4 | 5 | 440 | 1 | 423 | 0.8305 |
0.8658 |
| AF-A0A221V2Y7-F1-model_v4 | GT4 | 5 | 443 | 1 | 426 | 0.8303 |
0.8622 |
| AF-A0A0P0CQ75-F1-model_v4 | GT4 | 3 | 440 | 1 | 426 | 0.8303 |
0.8643 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A807N870 | GT4 | 6 | 443 | 1 | 439 | 0.8531 |
0.8751 |
| A0A345UNA4 | GT4 | 5 | 443 | 1 | 436 | 0.8336 |
0.8594 |
| A0A142L2D3 | GT4 | 5 | 443 | 1 | 435 | 0.8327 |
0.8575 |
| A0A089ZUU4 | GT4 | 5 | 443 | 1 | 422 | 0.8299 |
0.8659 |
| A0A3Q9FMS9 | GT4 | 5 | 443 | 1 | 434 | 0.8264 |
0.8526 |
| F4KZX3 | GT4 | 3 | 443 | 1 | 427 | 0.826 |
0.8586 |
| U5Q267 | GT4 | 5 | 443 | 1 | 432 | 0.8259 |
0.853 |
| WGK64082.1 | GT4 | 1 | 443 | 4 | 439 | 0.8247 |
0.8505 |
| F0NYB1 | GT4 | 4 | 443 | 1 | 434 | 0.8245 |
0.8527 |
| WBY00730.1 | GT4 | 6 | 443 | 1 | 423 | 0.8228 |
0.8592 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 6n1x-assembly1.cif.gz_A | 3 | 443 | 1 | 377 | 0.7249 |
0.8017 |
| 3oka-assembly1.cif.gz_A | 5 | 443 | 1 | 378 | 0.7217 |
0.7973 |
| 7qsg-assembly1.cif.gz_A | 3 | 443 | 1 | 377 | 0.7135 |
0.7909 |
| 6tvp-assembly1.cif.gz_B | 4 | 443 | 1 | 389 | 0.7125 |
0.7762 |
| 5d00-assembly1.cif.gz_B | 5 | 443 | 1 | 360 | 0.7103 |
0.8021 |
| 6tvp-assembly1.cif.gz_A | 4 | 443 | 1 | 386 | 0.7081 |
0.7745 |
| 5d01-assembly1.cif.gz_B | 5 | 443 | 1 | 359 | 0.7071 |
0.7998 |
| 3l01-assembly2.cif.gz_B | 4 | 441 | 1 | 428 | 0.7053 |
0.7365 |
| 5d00-assembly1.cif.gz_A | 5 | 443 | 1 | 359 | 0.7045 |
0.7976 |
| 5ze7-assembly1.cif.gz_B | 4 | 443 | 1 | 351 | 0.6994 |
0.7993 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P9WMZ3-F1-model_v4 | 5 | 443 | 1 | 384 | 0.7328 |
0.8041 |
| AF-P9WMZ2-F1-model_v4 | 5 | 443 | 1 | 383 | 0.7314 |
0.8054 |
| AF-A0R043-F1-model_v4 | 8 | 443 | 1 | 376 | 0.7288 |
0.8122 |
| AF-Q9DBE8-F1-model_v4 | 1 | 443 | 9 | 414 | 0.725 |
0.7842 |
| AF-Q93P60-F1-model_v4 | 6 | 443 | 1 | 390 | 0.7224 |
0.7927 |
| AF-Q8NNK8-F1-model_v4 | 2 | 443 | 1 | 381 | 0.7182 |
0.7911 |
| AF-P32057-F1-model_v4 | 6 | 442 | 1 | 407 | 0.7162 |
0.765 |
| AF-O94738-F1-model_v4 | 1 | 443 | 1 | 426 | 0.7122 |
0.7663 |
| AF-Q6BVA4-F1-model_v4 | 1 | 443 | 4 | 442 | 0.7091 |
0.7565 |
| AF-O07147-F1-model_v4 | 6 | 443 | 1 | 363 | 0.7083 |
0.808 |