Cluster: Rep_3024_CGC42
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3024
- CGC Family ID: CGCFAM_00103
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3024_c_17 | Rep_3024_c_17_50 | 60126 | 61322 | + | 3.A.1.1.34 |
| TC | Rep_3024_c_17 | Rep_3024_c_17_51 | 61325 | 62218 | + | 3.A.1.1.34 |
| CAZyme | Rep_3024_c_17 | Rep_3024_c_17_52 | 62344 | 63855 | + | GH51_1 |
| TC | Rep_3024_c_17 | Rep_3024_c_17_53 | 63935 | 64918 | - | 3.A.1.2.3 |
| NULL(UNKNOWN) | Rep_3024_c_17 | Rep_3024_c_17_54 | 64944 | 65816 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_3024_c_17 | Rep_3024_c_17_55 | 65813 | 67552 | - | 8.A.59.2.1 |
Gene ID: Rep_3024_c_17_50
Type: TC
Location: 60126 - 61322 (+)
Type: TC
Location: 60126 - 61322 (+)
Gene ID: Rep_3024_c_17_51
Type: TC
Location: 61325 - 62218 (+)
Type: TC
Location: 61325 - 62218 (+)
Gene ID: Rep_3024_c_17_52
Type: CAZyme
Location: 62344 - 63855 (+)
Type: CAZyme
Location: 62344 - 63855 (+)
Gene ID: Rep_3024_c_17_53
Type: TC
Location: 63935 - 64918 (-)
Type: TC
Location: 63935 - 64918 (-)
Gene ID: Rep_3024_c_17_54
Type:
Location: 64944 - 65816 (-)
Type:
Location: 64944 - 65816 (-)
Gene ID: Rep_3024_c_17_55
Type: TC
Location: 65813 - 67552 (-)
Type: TC
Location: 65813 - 67552 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Aristaeellaceae
Genus
Limiplasma
Species
Limiplasma sp023411375
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.