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PROTEIN: Rep_3024_c_17_54

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Protein File & Metadata
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Source:
Rep_3024_c_17_54.pdb
Genome ID:
Rep_3024
Protein ID:
Rep_3024_c_17_54

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Detailed structural information will appear here after analysis...

Protein Sequence 
MKRPIIISVV   CVAAAVLLLL   WGFGQTAPEA   GGEAERYALV   IRDDTGTFLM   QLRKGMQAAA 60
DEAGVSLSVI   GPGDLSASSK   YSALMVLAGV   DSPRLSEFPT   LYIGQTMKDA   WCVLHGDSGT 120
GVRLMERALA   LAPPGQTVLL   VDGGNARAAA   RSGAAEAFAG   THGVQVMDYD   SDGFTLPPNC 180
AAAVAASPRA   TQALAAMKRS   GTFDGAVLGV   DTGDSRVADL   EDGAVTVMAL   DNPYAMGYLA 240
LRKAREGVAL   TAEQLSAGYS   PDPIVVDALL   ADQQNMYLPE   NVKQVFPLLQ 290
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A0H3GM24-F1-model_v4 30 290 23 313 0.7096 0.8321
AF-Q329G5-F1-model_v4 30 290 23 313 0.7085 0.8311
AF-A0A0H3GSY6-F1-model_v4 31 289 29 317 0.7076 0.8367
AF-P77269-F1-model_v4 26 290 23 327 0.688 0.8122
AF-Q32DI0-F1-model_v4 12 274 11 329 0.6521 0.78
AF-A0A0H3GP52-F1-model_v4 26 288 16 307 0.6513 0.7581
AF-Q8ZKZ4-F1-model_v4 10 290 7 332 0.6501 0.7485
AF-P39265-F1-model_v4 35 273 25 311 0.6458 0.8201
AF-A0A132Z0F8-F1-model_v4 18 274 29 312 0.644 0.7708
AF-P38683-F1-model_v4 30 290 41 328 0.6422 0.7852
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
QVQ50493.1 GH13_30 27 274 29 328 0.4613 0.7401
AF-A0A7D7QXE9-F1-model_v4 CBM50 30 275 219 553 0.4569 0.6955
AF-A0A1M4E415-F1-model_v4 GH1 26 274 481 781 0.4472 0.7535
AF-A0A3G6TCS3-F1-model_v4 CBM50 30 274 301 633 0.4431 0.7095
AF-A0A0G3M1U1-F1-model_v4 CBM50 30 274 304 635 0.4431 0.7097
AF-A0A3G6PM60-F1-model_v4 CBM50 30 274 302 633 0.4416 0.7061
AF-A0A3G6R7T1-F1-model_v4 CBM50 28 274 300 633 0.4384 0.6952
AF-A0A3G6Q3D3-F1-model_v4 CBM50 28 274 308 643 0.4378 0.6983
AF-A0A5P5ZU97-F1-model_v4 CBM50 30 274 219 553 0.4374 0.6684
AF-A0A448LBA4-F1-model_v4 CBM50 30 274 315 646 0.4373 0.7032
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
QVQ50493.1 GH13_30 27 274 29 328 0.4613 0.7401
A0A2Z3UNP5 GH1 26 274 497 801 0.4438 0.7519
A0A177LJG9 CBM50 30 275 336 670 0.4284 0.6911
A0A1H2L9Q7 CBM66 , GH32 16 287 671 1025 0.426 0.7096
A0A068NET1 GH32 31 279 57 349 0.4248 0.7242
A0A2N6UZS3 GH32 30 289 55 684 0.4184 0.6865
C4ZGH1 GH53 34 290 1 433 0.4168 0.7462
AGT25470.1 GH32 26 274 505 810 0.3988 0.6735
ALJ95318.1 GH2 32 274 61 331 0.3766 0.7332
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
4rwe-assembly1.cif.gz_A 32 288 1 287 0.7383 0.8443
1urp-assembly2.cif.gz_B 34 274 1 271 0.7365 0.8693
5hsg-assembly1.cif.gz_A 34 288 1 285 0.7326 0.8397
3g1w-assembly1.cif.gz_B 34 286 1 290 0.7312 0.8524
1ba2-assembly2.cif.gz_B 34 274 1 271 0.7308 0.8632
6sw4-assembly1.cif.gz_A 33 287 1 290 0.7264 0.8407
1gud-assembly2.cif.gz_B 34 273 1 288 0.7231 0.8814
5xsd-assembly1.cif.gz_B 30 277 1 276 0.7201 0.8364
3g1w-assembly1.cif.gz_A 35 286 1 291 0.7199 0.8448
4kq9-assembly1.cif.gz_A 29 290 2 298 0.7186 0.8225
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-P77269-F1-model_v4 26 290 23 327 0.688 0.8122
AF-P39265-F1-model_v4 35 273 25 311 0.6458 0.8201
AF-P38683-F1-model_v4 30 290 41 328 0.6422 0.7852
AF-O06987-F1-model_v4 17 274 29 313 0.6421 0.7676
AF-P37387-F1-model_v4 27 289 18 329 0.6421 0.7698
AF-P55568-F1-model_v4 29 290 24 324 0.6393 0.7636
AF-P58358-F1-model_v4 30 290 41 328 0.6374 0.7796
AF-P02924-F1-model_v4 29 287 20 329 0.6368 0.7717
AF-P62604-F1-model_v4 16 275 24 330 0.636 0.7677
AF-P06846-F1-model_v4 11 275 13 325 0.6349 0.7526
Download Full SwissProt Results