Cluster: Rep_3024_CGC31
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3024
- CGC Family ID: CGCFAM_00666
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3024_c_12 | Rep_3024_c_12_8 | 3751 | 4587 | + | 3.A.1.149.1 |
| pfam | Rep_3024_c_12 | Rep_3024_c_12_9 | 4641 | 5288 | + | ABC2_membrane_5 |
| TC | Rep_3024_c_12 | Rep_3024_c_12_10 | 5525 | 6253 | + | 3.A.1.1.49 |
| pfam | Rep_3024_c_12 | Rep_3024_c_12_11 | 6250 | 7167 | + | SUFBD_core |
| CAZyme | Rep_3024_c_12 | Rep_3024_c_12_12 | 7178 | 8038 | - | CE4 |
Gene ID: Rep_3024_c_12_8
Type: TC
Location: 3751 - 4587 (+)
Type: TC
Location: 3751 - 4587 (+)
Gene ID: Rep_3024_c_12_9
Type: pfam
Location: 4641 - 5288 (+)
Type: pfam
Location: 4641 - 5288 (+)
Gene ID: Rep_3024_c_12_10
Type: TC
Location: 5525 - 6253 (+)
Type: TC
Location: 5525 - 6253 (+)
Gene ID: Rep_3024_c_12_11
Type: pfam
Location: 6250 - 7167 (+)
Type: pfam
Location: 6250 - 7167 (+)
Gene ID: Rep_3024_c_12_12
Type: CAZyme
Location: 7178 - 8038 (-)
Type: CAZyme
Location: 7178 - 8038 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Aristaeellaceae
Genus
Limiplasma
Species
Limiplasma sp023411375
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.