Cluster: Rep_3012_CGC26
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3012
- CGC Family ID: CGCFAM_00047
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3012_c_1 | Rep_3012_c_1_1558 | 1651277 | 1652176 | - | 3.A.1.1.20 |
| TC | Rep_3012_c_1 | Rep_3012_c_1_1559 | 1652173 | 1653141 | - | 3.A.1.1.4 |
| NULL(UNKNOWN) | Rep_3012_c_1 | Rep_3012_c_1_1560 | 1653315 | 1654691 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TF | Rep_3012_c_1 | Rep_3012_c_1_1561 | 1654804 | 1655841 | - | LacI |
| CAZyme | Rep_3012_c_1 | Rep_3012_c_1_1562 | 1656249 | 1658468 | - | GT113 | GT4 |
Gene ID: Rep_3012_c_1_1558
Type: TC
Location: 1651277 - 1652176 (-)
Type: TC
Location: 1651277 - 1652176 (-)
Gene ID: Rep_3012_c_1_1559
Type: TC
Location: 1652173 - 1653141 (-)
Type: TC
Location: 1652173 - 1653141 (-)
Gene ID: Rep_3012_c_1_1560
Type:
Location: 1653315 - 1654691 (-)
Type:
Location: 1653315 - 1654691 (-)
Gene ID: Rep_3012_c_1_1561
Type: TF
Location: 1654804 - 1655841 (-)
Type: TF
Location: 1654804 - 1655841 (-)
Gene ID: Rep_3012_c_1_1562
Type: CAZyme
Location: 1656249 - 1658468 (-)
Type: CAZyme
Location: 1656249 - 1658468 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Aristaeellaceae
Genus
UBA11524
Species
UBA11524 sp000437595
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| Rep_3012_c_1_1561 | vegetarian > vegan | 1.11242 | 0.00307 |
| Rep_3012_c_1_1562 | vegetarian > vegan | 1.30282 | 0.00307 |