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PROTEIN: Rep_3012_c_1_1560

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Protein File & Metadata
Download PDB File
Source:
Rep_3012_c_1_1560.pdb
Genome ID:
Rep_3012
Protein ID:
Rep_3012_c_1_1560

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Detailed structural information will appear here after analysis...

Protein Sequence 
MKKLVALLLC   LMMVVPATLA   SAETAEGKVL   NIWCWNDEFQ   SRFNAYYPEV   KEIAEDKSTT 60
TLNDGTIVKW   TINPNEGNNY   QNKLDEALRA   QESAAADDKI   DIFLIEADYA   LKYVDSPYTL 120
DVKADIGLTD   EDLGGQYKYT   QEIATSADGK   LKAVTWQATP   GLFAYRRSIA   KDVLGTDDPD 180
AVQEALADWD   KFNAVAEQAA   AKGYYMLSGY   DDAYRTFSNN   VSAPWVADDG   ETVVVDANLM 240
KWVDQTKTYT   EKGYNHKSSL   LDATWAADQG   PTGKVFGFFY   STWGINFTLL   GNSLETSVAN 300
GGKEEVGNGA   YGDYAVCQGP   QAYYWGGTWI   CAAAGTDNVA   TIKDVMQKLT   CDAAIAKKIT 360
EDTQDYTNNV   AAMNELAQNY   SSAFLGGQNH   IALFAEAAPK   IDMSNISAYD   QGLNESFQGA 420
FKNYFDGNAT   IDEAKAQFES   IISEKYPELV   NFQWPDAE 458
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-K0F002-F1-model_v4 23 449 43 439 0.7264 0.8314
AF-K0EWS5-F1-model_v4 24 455 24 457 0.724 0.7825
AF-K0EWS9-F1-model_v4 4 450 27 463 0.7169 0.7718
AF-K0F1Y0-F1-model_v4 23 448 48 433 0.7142 0.8342
AF-P71619-F1-model_v4 24 451 33 429 0.7129 0.8148
AF-K0F2E6-F1-model_v4 24 450 40 436 0.7123 0.819
AF-P76042-F1-model_v4 23 449 24 430 0.7122 0.7922
AF-A0A133CPC5-F1-model_v4 23 451 31 423 0.7092 0.8076
AF-Q8DNN7-F1-model_v4 27 450 34 434 0.7017 0.7966
AF-A0A132ZDH4-F1-model_v4 25 450 29 427 0.6997 0.7898
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
AF-K8EJG7-F1-model_v4 CBM50 , CE4 25 451 32 416 0.669 0.773
AF-K8E205-F1-model_v4 GH32 25 429 32 344 0.6212 0.7878
A0A9Q8PNJ5 GH4 24 449 468 866 0.5424 0.8093
AF-A0A1B0VLS2-F1-model_v4 CBM0 24 451 543 948 0.5051 0.7701
UJP10085.1 GH154 1 429 309 1168 0.4075 0.6556
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
K8EJG7 CBM50 , CE4 25 451 32 416 0.669 0.773
K8E205 GH32 25 429 32 344 0.6212 0.7878
A0A0M1Q963 GH43_11 20 453 37 494 0.6133 0.6956
A0A7U1BNH7 GH10 25 453 28 735 0.5456 0.7234
A0A9Q8PNJ5 GH4 24 449 468 866 0.5424 0.8093
A0A1Q2TKJ3 GH49 25 450 385 797 0.5314 0.7458
UJP10085.1 GH154 1 429 309 1168 0.4075 0.6556
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
5ixp-assembly1.cif.gz_A 27 447 1 393 0.8291 0.9049
3uor-assembly2.cif.gz_B 28 451 1 389 0.7708 0.8553
6x84-assembly2.cif.gz_B 26 450 1 411 0.7528 0.8128
7c6z-assembly1.cif.gz_A 28 450 1 415 0.7473 0.8019
4rk2-assembly1.cif.gz_A 26 447 1 393 0.745 0.8189
7vfr-assembly1.cif.gz_A 27 453 1 397 0.7449 0.8162
7vfq-assembly2.cif.gz_B 27 453 1 396 0.7445 0.8169
2z8d-assembly2.cif.gz_B 22 453 1 399 0.7442 0.8143
7vfq-assembly1.cif.gz_A 27 453 1 394 0.7436 0.8178
7c6x-assembly7.cif.gz_G 29 450 1 414 0.743 0.8
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-P29822-F1-model_v4 25 447 26 422 0.7667 0.8602
AF-P94528-F1-model_v4 26 448 32 433 0.7553 0.8476
AF-Q9K491-F1-model_v4 15 449 22 424 0.7386 0.8227
AF-Q9KEE7-F1-model_v4 27 450 44 445 0.7232 0.825
AF-P76042-F1-model_v4 23 449 24 430 0.7122 0.7922
AF-Q8FVS7-F1-model_v4 25 450 23 411 0.7082 0.8042
AF-Q578M8-F1-model_v4 25 451 23 411 0.7074 0.8034
AF-Q2YKZ9-F1-model_v4 25 451 23 411 0.7059 0.8018
AF-Q53684-F1-model_v4 22 449 23 423 0.7022 0.8086
AF-O31518-F1-model_v4 21 449 28 427 0.7003 0.7899
Download Full SwissProt Results