Cluster: Rep_3006_CGC54
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_3006
- CGC Family ID: CGCFAM_00831
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3006_c_92 | Rep_3006_c_92_1 | 653 | 1684 | + | GH33 |
| TF | Rep_3006_c_92 | Rep_3006_c_92_2 | 1798 | 2733 | + | HTH_AraC | HTH_AraC |
| NULL(UNKNOWN) | Rep_3006_c_92 | Rep_3006_c_92_3 | 2852 | 4495 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_3006_c_92 | Rep_3006_c_92_4 | 4583 | 5524 | + | 3.A.1.1.29 |
| TC | Rep_3006_c_92 | Rep_3006_c_92_5 | 5537 | 6436 | + | 3.A.1.1.29 |
| CAZyme | Rep_3006_c_92 | Rep_3006_c_92_6 | 6473 | 8671 | + | GH36 |
Gene ID: Rep_3006_c_92_1
Type: CAZyme
Location: 653 - 1684 (+)
Type: CAZyme
Location: 653 - 1684 (+)
Gene ID: Rep_3006_c_92_2
Type: TF
Location: 1798 - 2733 (+)
Type: TF
Location: 1798 - 2733 (+)
Gene ID: Rep_3006_c_92_3
Type:
Location: 2852 - 4495 (+)
Type:
Location: 2852 - 4495 (+)
Gene ID: Rep_3006_c_92_4
Type: TC
Location: 4583 - 5524 (+)
Type: TC
Location: 4583 - 5524 (+)
Gene ID: Rep_3006_c_92_5
Type: TC
Location: 5537 - 6436 (+)
Type: TC
Location: 5537 - 6436 (+)
Gene ID: Rep_3006_c_92_6
Type: CAZyme
Location: 6473 - 8671 (+)
Type: CAZyme
Location: 6473 - 8671 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Aristaeellaceae
Genus
Alectryocaccomicrobium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.