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PROTEIN: Rep_3006_c_92_3

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Protein File & Metadata
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Source:
Rep_3006_c_92_3.pdb
Genome ID:
Rep_3006
Protein ID:
Rep_3006_c_92_3

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Detailed structural information will appear here after analysis...

Protein Sequence 
MLKKALALVM   ALSLALGAAA   MAEENAFGWE   VPEETLRIYS   FYNSSNFATG   EEQDLGIENM 60
KAYMLENFNV   EYEIITTDGD   ADEQLNLMLA   SDTYPDIIVG   ASTINRQKFV   DQGRAVDLTD 120
YIANCPNLQH   RMGDMLGLYA   DEDGRIYYLP   TTFSNLMDLP   DYSAHIRYDE   WTEIGSPEIN 180
TPEDWYNAIM   AIYELHPTTD   EGEQRYTLGL   YSQGMPEYLG   GYWGLQQGWK   VNDDNTLTYW 240
THTDEGKKMA   AFFNSWWRTG   TMDPDSMTNE   WDDLRTKISQ   ERVIAMIGGW   WIGYNAGHEI 300
WSLTDEDWYE   EKRFIQVGFK   DEDAENAYIT   MKNNAGGSWT   IITDKCENVE   GVMQWLDFTL 360
SDKGIALVNW   GIPNEVQSYK   NPDETVCIWE   LNDDGTWKFN   DTAKQELIDE   VWDYNEEGVF 420
GGNTGIFKLT   SYQGRFDDGV   HCLWANQMWY   SENKWKGIMF   ENMDGTIFDG   TALLYESLEM 480
DEDVTFAKTA   VADAWKQYYP   LVIMADTDDA   FEAAWADLQM   AVESAGLETY   AQYRTENYQH 540
NLELMVE 547
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A133CZN8-F1-model_v4 31 544 33 502 0.7382 0.8351
AF-A0A133D019-F1-model_v4 35 544 36 485 0.6542 0.7601
AF-A0A133CSA1-F1-model_v4 2 529 10 427 0.6244 0.7316
AF-K0EWS5-F1-model_v4 34 532 24 455 0.612 0.7176
AF-P76042-F1-model_v4 5 533 14 430 0.6102 0.7203
AF-A0A0H3GKJ8-F1-model_v4 1 533 7 406 0.6064 0.7249
AF-Q8DNU8-F1-model_v4 33 534 37 440 0.6019 0.7376
AF-A0A132ZDH4-F1-model_v4 32 527 27 427 0.5967 0.7244
AF-A0A133CDW9-F1-model_v4 34 536 42 444 0.5939 0.731
AF-A0A133CPC5-F1-model_v4 32 533 30 423 0.5922 0.7274
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A0M1Q963 GH43_11 32 544 41 506 0.6894 0.7917
A0A9Q8PNJ5 GH4 33 533 468 866 0.4588 0.7432
AF-A0A7U1BNH7-F1-model_v4 GH10 34 539 27 741 0.4561 0.572
AF-A0A1B0VLS2-F1-model_v4 CBM0 32 547 541 964 0.4461 0.7144
A0A242CSU4 CBM35 34 547 573 998 0.4437 0.7149
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A0M1Q963 GH43_11 32 544 41 506 0.6894 0.7917
A0A9Q8PNJ5 GH4 33 533 468 866 0.4588 0.7432
A0A7U1BNH7 GH10 34 539 27 741 0.4561 0.572
A0A242CSU4 CBM35 34 547 573 998 0.4437 0.7149
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
5g5y-assembly1.cif.gz_A 33 547 1 494 0.7844 0.8405
6fth-assembly1.cif.gz_A 33 546 1 496 0.7596 0.8131
3omb-assembly1.cif.gz_A 33 543 5 503 0.7576 0.8111
5g62-assembly2.cif.gz_B 37 546 1 491 0.728 0.7883
5xs8-assembly1.cif.gz_A 35 539 1 474 0.7242 0.7952
4tqu-assembly1.cif.gz_Q 23 547 1 492 0.7212 0.7798
5h6u-assembly1.cif.gz_A 29 546 1 487 0.7186 0.7802
6jhx-assembly2.cif.gz_B 23 543 1 483 0.7157 0.7799
3vlw-assembly2.cif.gz_B 23 546 1 489 0.714 0.7748
5suo-assembly1.cif.gz_A 35 547 1 451 0.6772 0.7611
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A0H2URD6-F1-model_v4 21 547 39 538 0.7635 0.8416
AF-P37966-F1-model_v4 32 543 31 502 0.7399 0.8344
AF-Q795R2-F1-model_v4 22 543 35 498 0.724 0.8263
AF-O31518-F1-model_v4 1 533 12 427 0.6375 0.7498
AF-Q8FVS7-F1-model_v4 34 533 22 411 0.6177 0.7543
AF-Q578M8-F1-model_v4 34 533 22 411 0.6164 0.7529
AF-Q2YKZ9-F1-model_v4 34 533 22 411 0.6151 0.751
AF-P76042-F1-model_v4 5 533 14 430 0.6102 0.7203
AF-Q53684-F1-model_v4 34 533 26 423 0.5925 0.7405
AF-Q9RUE8-F1-model_v4 32 537 17 420 0.5852 0.7017
Download Full SwissProt Results