Cluster: Rep_3005_CGC29
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3005
- CGC Family ID: CGCFAM_01956
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3005_c_28 | Rep_3005_c_28_17 | 27787 | 29532 | + | 8.A.59.2.1 |
| TC | Rep_3005_c_28 | Rep_3005_c_28_18 | 29627 | 30601 | + | 3.A.1.1.29 |
| TC | Rep_3005_c_28 | Rep_3005_c_28_19 | 30598 | 31473 | + | 3.A.1.1.29 |
| NULL(UNKNOWN) | Rep_3005_c_28 | Rep_3005_c_28_20 | 31544 | 33199 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_3005_c_28 | Rep_3005_c_28_21 | 33414 | 35270 | + | GH20 |
Gene ID: Rep_3005_c_28_17
Type: TC
Location: 27787 - 29532 (+)
Type: TC
Location: 27787 - 29532 (+)
Gene ID: Rep_3005_c_28_18
Type: TC
Location: 29627 - 30601 (+)
Type: TC
Location: 29627 - 30601 (+)
Gene ID: Rep_3005_c_28_19
Type: TC
Location: 30598 - 31473 (+)
Type: TC
Location: 30598 - 31473 (+)
Gene ID: Rep_3005_c_28_20
Type:
Location: 31544 - 33199 (+)
Type:
Location: 31544 - 33199 (+)
Gene ID: Rep_3005_c_28_21
Type: CAZyme
Location: 33414 - 35270 (+)
Type: CAZyme
Location: 33414 - 35270 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Aristaeellaceae
Genus
Alectryocaccomicrobium
Species
Alectryocaccomicrobium faecavium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.