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PROTEIN: Rep_3005_c_28_20

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Protein File & Metadata
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Source:
Rep_3005_c_28_20.pdb
Genome ID:
Rep_3005
Protein ID:
Rep_3005_c_28_20

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Detailed structural information will appear here after analysis...

Protein Sequence 
MKRTRIALLL   ALVMLMSALP   VAASAEAEVV   DLYVTYIDGF   TALEPDAEPR   SPIFDEIERQ 60
TGVRMHYNVV   TGDRADVLMS   NGELGDILMI   YNSSDLMTAI   ESGLVVDLSQ   MVAEKAPNIA 120
ANADRVQMAQ   VLSGTEDGTY   YFLPVQTGSE   GAPGTPYHSL   YLTRWDLYKE   LGSPEITNLD 180
EYLDMLIEMQ   KLEPQTADGK   TVYAYSLVLS   SIRDVAWPWH   YTFGYYTSND   FINTNINTGE 240
MVYEPLDEDS   PFWNSLAFYN   KVYKAGLFDP   DSFTQTNDDK   VAKAANGQVL   CPVWNSDGVA 300
FETANSPKGF   QVLPVEGTTY   WCNSYYPGGW   DACFVGITST   CSDPEAALRL   LDFLSTEDGA 360
RLVYSGVQGM   HWDYDENGVP   MLEETVLTNY   MELNADWYAL   GAQDGIFKSI   TGPGVGEIHS 420
DGYPMNLFLT   KQVFEKQLTE   CDKDYCETYG   VSYPMEVLLQ   KMEEGTIHDH   VNDVFDMRVV 480
TGMGSAPEDI   ARIDEMICNK   AMELVPGLIM   AEDFETAKAE   ALETLWGYGG   EEARGWWQAR 540
HDSLTELFCG   D 551
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A133CZN8-F1-model_v4 25 547 33 502 0.6693 0.7626
AF-A0A133D019-F1-model_v4 28 547 36 485 0.6596 0.7683
AF-P76042-F1-model_v4 19 537 18 430 0.5897 0.703
AF-Q8DNU8-F1-model_v4 22 536 33 437 0.5794 0.7095
AF-A0A132ZDH4-F1-model_v4 22 533 23 427 0.5782 0.6983
AF-A0A0H3GHK7-F1-model_v4 22 543 15 432 0.5753 0.6842
AF-O53485-F1-model_v4 30 540 35 439 0.5733 0.7016
AF-K0F8J3-F1-model_v4 29 537 29 434 0.5728 0.6975
AF-Q8DRJ6-F1-model_v4 28 551 60 514 0.5723 0.6802
AF-A0A133CSA1-F1-model_v4 17 536 16 427 0.569 0.6783
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A0M1Q963 GH43_11 25 551 42 506 0.6551 0.757
AF-K8EJG7-F1-model_v4 CBM50 , CE4 28 539 33 416 0.5495 0.6868
AF-A0A7U1BNH7-F1-model_v4 GH10 25 551 25 745 0.4445 0.5398
AF-A0A1B0VLS2-F1-model_v4 CBM0 25 551 541 967 0.4277 0.6814
UJP10085.1 GH154 26 510 706 1168 0.3302 0.5504
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A0M1Q963 GH43_11 25 551 42 506 0.6551 0.757
K8EJG7 CBM50 , CE4 28 539 33 416 0.5495 0.6868
A0A7U1BNH7 GH10 25 551 25 745 0.4445 0.5398
A0A242CSU4 CBM35 28 550 572 995 0.4245 0.6885
UJP10085.1 GH154 26 510 706 1168 0.3302 0.5504
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
6fth-assembly1.cif.gz_A 27 550 1 496 0.7368 0.7935
3omb-assembly1.cif.gz_A 25 546 3 503 0.7331 0.7877
5g5y-assembly1.cif.gz_A 27 549 1 494 0.727 0.7864
5xs8-assembly1.cif.gz_A 29 545 1 474 0.708 0.7799
3vlw-assembly2.cif.gz_B 24 551 4 489 0.7072 0.7731
5h6u-assembly1.cif.gz_A 26 551 4 487 0.7058 0.7733
5g62-assembly2.cif.gz_B 30 551 1 490 0.7045 0.767
4tqu-assembly1.cif.gz_Q 26 551 7 492 0.7041 0.772
6jhx-assembly2.cif.gz_B 26 547 7 483 0.6964 0.7699
5suo-assembly1.cif.gz_A 29 551 1 451 0.6836 0.7695
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A0H2URD6-F1-model_v4 24 549 42 538 0.7101 0.7928
AF-P37966-F1-model_v4 25 546 31 502 0.68 0.7715
AF-Q795R2-F1-model_v4 24 547 36 498 0.6492 0.7484
AF-P76042-F1-model_v4 19 537 18 430 0.5897 0.703
AF-Q8FVS7-F1-model_v4 25 537 20 411 0.5846 0.7137
AF-Q578M8-F1-model_v4 25 537 20 411 0.5835 0.7126
AF-Q2YKZ9-F1-model_v4 25 537 20 411 0.5813 0.7102
AF-A0A0H2UMY0-F1-model_v4 28 551 37 491 0.5791 0.6758
AF-Q9RUE8-F1-model_v4 22 540 13 420 0.5711 0.6822
AF-Q00749-F1-model_v4 24 539 30 420 0.5704 0.7041
Download Full SwissProt Results