Cluster: Rep_3001_CGC9
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3001
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3001_c_8 | Rep_3001_c_8_67 | 62100 | 63677 | + | 3.A.1.121.3 |
| pfam | Rep_3001_c_8 | Rep_3001_c_8_68 | 63828 | 65297 | - | PPK2 | PPK2 |
| CAZyme | Rep_3001_c_8 | Rep_3001_c_8_69 | 65423 | 67465 | - | GH151 |
| TC | Rep_3001_c_8 | Rep_3001_c_8_70 | 67642 | 68952 | + | 2.A.49.9.2 |
Gene ID: Rep_3001_c_8_67
Type: TC
Location: 62100 - 63677 (+)
Type: TC
Location: 62100 - 63677 (+)
Gene ID: Rep_3001_c_8_68
Type: pfam
Location: 63828 - 65297 (-)
Type: pfam
Location: 63828 - 65297 (-)
Gene ID: Rep_3001_c_8_69
Type: CAZyme
Location: 65423 - 67465 (-)
Type: CAZyme
Location: 65423 - 67465 (-)
Gene ID: Rep_3001_c_8_70
Type: TC
Location: 67642 - 68952 (+)
Type: TC
Location: 67642 - 68952 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
UBA1750
Genus
Spyradocola
Species
Spyradocola merdavium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.