Cluster: Rep_3001_CGC5
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3001
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3001_c_5 | Rep_3001_c_5_13 | 11282 | 12820 | - | 2.A.66.1.45 |
| NULL(UNKNOWN) | Rep_3001_c_5 | Rep_3001_c_5_14 | 13035 | 14567 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_3001_c_5 | Rep_3001_c_5_15 | 14610 | 16007 | - | 2.A.66.1.33 |
| NULL(UNKNOWN) | Rep_3001_c_5 | Rep_3001_c_5_16 | 16202 | 17263 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_3001_c_5 | Rep_3001_c_5_17 | 17260 | 19107 | + | GH63 |
| TC | Rep_3001_c_5 | Rep_3001_c_5_18 | 19253 | 20992 | + | 3.A.7.13.2 |
Gene ID: Rep_3001_c_5_13
Type: TC
Location: 11282 - 12820 (-)
Type: TC
Location: 11282 - 12820 (-)
Gene ID: Rep_3001_c_5_14
Type:
Location: 13035 - 14567 (+)
Type:
Location: 13035 - 14567 (+)
Gene ID: Rep_3001_c_5_15
Type: TC
Location: 14610 - 16007 (-)
Type: TC
Location: 14610 - 16007 (-)
Gene ID: Rep_3001_c_5_16
Type:
Location: 16202 - 17263 (+)
Type:
Location: 16202 - 17263 (+)
Gene ID: Rep_3001_c_5_17
Type: CAZyme
Location: 17260 - 19107 (+)
Type: CAZyme
Location: 17260 - 19107 (+)
Gene ID: Rep_3001_c_5_18
Type: TC
Location: 19253 - 20992 (+)
Type: TC
Location: 19253 - 20992 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
UBA1750
Genus
Spyradocola
Species
Spyradocola merdavium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.