Cluster: Rep_3001_CGC3
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3001
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3001_c_1 | Rep_3001_c_1_78 | 76052 | 77404 | - | 2.A.66.1.28 |
| pfam | Rep_3001_c_1 | Rep_3001_c_1_79 | 77430 | 78347 | - | Tim44 |
| pfam | Rep_3001_c_1 | Rep_3001_c_1_80 | 78447 | 79070 | + | QueH |
| CAZyme | Rep_3001_c_1 | Rep_3001_c_1_81 | 79122 | 80225 | - | CE2 |
Gene ID: Rep_3001_c_1_78
Type: TC
Location: 76052 - 77404 (-)
Type: TC
Location: 76052 - 77404 (-)
Gene ID: Rep_3001_c_1_79
Type: pfam
Location: 77430 - 78347 (-)
Type: pfam
Location: 77430 - 78347 (-)
Gene ID: Rep_3001_c_1_80
Type: pfam
Location: 78447 - 79070 (+)
Type: pfam
Location: 78447 - 79070 (+)
Gene ID: Rep_3001_c_1_81
Type: CAZyme
Location: 79122 - 80225 (-)
Type: CAZyme
Location: 79122 - 80225 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
UBA1750
Genus
Spyradocola
Species
Spyradocola merdavium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.