Cluster: Rep_3001_CGC20
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3001
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3001_c_22 | Rep_3001_c_22_31 | 25883 | 27766 | - | GH97 |
| pfam | Rep_3001_c_22 | Rep_3001_c_22_32 | 27939 | 28964 | + | SpoIID |
| TC | Rep_3001_c_22 | Rep_3001_c_22_33 | 28983 | 29642 | - | 2.A.38.4.4 |
| TC | Rep_3001_c_22 | Rep_3001_c_22_34 | 29674 | 31086 | - | 2.A.38.4.1 |
Gene ID: Rep_3001_c_22_31
Type: CAZyme
Location: 25883 - 27766 (-)
Type: CAZyme
Location: 25883 - 27766 (-)
Gene ID: Rep_3001_c_22_32
Type: pfam
Location: 27939 - 28964 (+)
Type: pfam
Location: 27939 - 28964 (+)
Gene ID: Rep_3001_c_22_33
Type: TC
Location: 28983 - 29642 (-)
Type: TC
Location: 28983 - 29642 (-)
Gene ID: Rep_3001_c_22_34
Type: TC
Location: 29674 - 31086 (-)
Type: TC
Location: 29674 - 31086 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
UBA1750
Genus
Spyradocola
Species
Spyradocola merdavium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.