Cluster: Rep_3001_CGC14
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3001
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3001_c_14 | Rep_3001_c_14_48 | 47842 | 48765 | - | 8.A.5.1.4 |
| pfam | Rep_3001_c_14 | Rep_3001_c_14_49 | 48784 | 49458 | - | Hexapep |
| STP | Rep_3001_c_14 | Rep_3001_c_14_50 | 49561 | 49923 | - | AraC_binding |
| CAZyme | Rep_3001_c_14 | Rep_3001_c_14_51 | 50061 | 51332 | + | GH26 |
Gene ID: Rep_3001_c_14_48
Type: TC
Location: 47842 - 48765 (-)
Type: TC
Location: 47842 - 48765 (-)
Gene ID: Rep_3001_c_14_49
Type: pfam
Location: 48784 - 49458 (-)
Type: pfam
Location: 48784 - 49458 (-)
Gene ID: Rep_3001_c_14_50
Type: STP
Location: 49561 - 49923 (-)
Type: STP
Location: 49561 - 49923 (-)
Gene ID: Rep_3001_c_14_51
Type: CAZyme
Location: 50061 - 51332 (+)
Type: CAZyme
Location: 50061 - 51332 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
UBA1750
Genus
Spyradocola
Species
Spyradocola merdavium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.