Cluster: Rep_2600_CGC3
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2600
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2600_c_48 | Rep_2600_c_48_17 | 15257 | 15949 | + | 2.A.87.3.2 |
| NULL(UNKNOWN) | Rep_2600_c_48 | Rep_2600_c_48_18 | 16019 | 16381 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | Rep_2600_c_48 | Rep_2600_c_48_19 | 16442 | 17755 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_2600_c_48 | Rep_2600_c_48_20 | 17734 | 18801 | - | GT28 |
Gene ID: Rep_2600_c_48_17
Type: TC
Location: 15257 - 15949 (+)
Type: TC
Location: 15257 - 15949 (+)
Gene ID: Rep_2600_c_48_18
Type:
Location: 16019 - 16381 (-)
Type:
Location: 16019 - 16381 (-)
Gene ID: Rep_2600_c_48_19
Type:
Location: 16442 - 17755 (-)
Type:
Location: 16442 - 17755 (-)
Gene ID: Rep_2600_c_48_20
Type: CAZyme
Location: 17734 - 18801 (-)
Type: CAZyme
Location: 17734 - 18801 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
CAG-917
Genus
Limadaptatus
Species
Limadaptatus sp944372795
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.