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PROTEIN: Rep_2600_c_48_19

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Protein File & Metadata
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Source:
Rep_2600_c_48_19.pdb
Genome ID:
Rep_2600
Protein ID:
Rep_2600_c_48_19

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Detailed structural information will appear here after analysis...

Protein Sequence 
MQRQKTVAKW   LAIILLVTIA   VGAYIMYDAV   YLEGGDTAAG   DEPVTPPDTE   PDPAPPETDP 60
PFYTTLPRAA   QTFAGIKVAH   AGGEGDERVL   ATVFTDGTAY   VFFSSESSEY   DCRGSGLYLA 120
LHDGDSLISV   TRFAAGSATF   GGAKLTSDGV   AAAVSDGGTG   TLFVFGTDGS   VKGETSLPAF 180
TSAFLLSHGG   ELMLFLSDGT   ALTCHTVQKG   LSVTSSPFRL   AGDRAVTEGF   AAGEVFTLSA 240
QRGEDTEIVT   FSQNSGFIVT   ECYEKTSFRQ   IVPVAGEDGA   AFCLLGSKAS   GMLLAVLSAS 300
GEELSSATLD   GGTEGALFGD   GVSVILVRTG   LTQTFCRHLD   LIASAPTDLE   VYGVAAVRES 360
GGKRALVTRD   AEGDVEVLLS   SEGGDFVTLA   ECSGGEGNVR   AEFLDGDLVI   SLSSSSREGI 420
FFENFGAGDA   YLLRLPA 437
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-Q8BHJ5-F1-model_v4 1 437 1 514 0.6007 0.6642
AF-A5WVU0-F1-model_v4 1 437 1 509 0.5922 0.6518
AF-A5WV44-F1-model_v4 73 437 26 329 0.5908 0.7532
AF-D3ZNF4-F1-model_v4 1 437 1 514 0.5899 0.652
AF-A0A0N4U7I4-F1-model_v4 78 437 1 289 0.5898 0.7605
AF-Q9BQ87-F1-model_v4 1 436 1 522 0.5888 0.6551
AF-Q9BZK7-F1-model_v4 1 437 1 514 0.5887 0.6507
AF-A0A175VV49-F1-model_v4 3 435 8 401 0.5843 0.6376
AF-Q93454-F1-model_v4 65 437 5 363 0.5809 0.6669
AF-J9EZU4-F1-model_v4 71 437 19 361 0.5786 0.6896
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A7S8D2X3-F1-model_v4 PL42 74 437 22 436 0.5792 0.7046
AF-A0A6M7YHG8-F1-model_v4 PL42 74 437 22 436 0.5785 0.7039
A0A9W8R6M4 PL42 74 437 21 435 0.5781 0.702
AF-A0A6I6JIM3-F1-model_v4 PL42 74 437 36 462 0.556 0.6933
AF-A0A1B2HED9-F1-model_v4 GH184 1 437 42 519 0.5137 0.5779
AF-A0A7S7NQE7-F1-model_v4 PL0 1 437 79 1040 0.5015 0.7138
AF-A0A6I6MRI6-F1-model_v4 GH30_5 1 437 437 808 0.442 0.6697
AF-A0A1C4VSA9-F1-model_v4 GH43_26 70 397 366 660 0.4164 0.7138
AF-A0A140K141-F1-model_v4 CBM6 73 437 14 338 0.4127 0.7529
A0A2S0LH69 GH65 3 437 681 1072 0.3698 0.6171
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A9W8R6M4 PL42 74 437 21 435 0.5781 0.702
A0A6B8M5E0 PL42 73 437 10 428 0.5404 0.6529
A0A1B2HED9 GH184 1 437 42 519 0.5137 0.5779
A0A6I6MRI6 GH30_5 1 437 437 808 0.442 0.6697
A0A140K141 CBM6 73 437 14 338 0.4127 0.7529
Q9S1V9 GH33 70 413 453 748 0.411 0.7353
A0A0B5EIV7 GH20 96 437 436 802 0.4024 0.6531
A0A518AQF0 PL42 73 437 33 485 0.3887 0.6798
A0A2S0LH69 GH65 3 437 681 1072 0.3698 0.6171
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
6y7o-assembly3.cif.gz_C 75 437 1 312 0.7096 0.8444
6g6o-assembly3.cif.gz_C 73 437 1 318 0.7052 0.832
5nnz-assembly2.cif.gz_B 74 436 2 335 0.7048 0.817
7ax2-assembly1.cif.gz_A 88 437 1 299 0.6777 0.8355
6v05-assembly1.cif.gz_B 73 437 15 340 0.6767 0.8071
7ttc-assembly1.cif.gz_B 73 435 15 327 0.6663 0.8083
4imm-assembly1.cif.gz_A 74 437 3 331 0.6633 0.776
7cqy-assembly1.cif.gz_A 28 437 6 423 0.6424 0.6916
8fdt-assembly1.cif.gz_B 73 437 3 316 0.6288 0.7505
8cyi-assembly1.cif.gz_B 65 437 1 305 0.6244 0.7528
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-O28918-F1-model_v4 74 437 33 350 0.6139 0.7631
AF-Q6GPC6-F1-model_v4 1 437 39 521 0.6057 0.6735
AF-Q8BHJ5-F1-model_v4 1 437 1 514 0.6007 0.6642
AF-Q7SZM9-F1-model_v4 1 437 1 519 0.596 0.6615
AF-Q9BQ87-F1-model_v4 1 436 1 522 0.5888 0.6551
AF-Q9BZK7-F1-model_v4 1 437 1 514 0.5887 0.6507
AF-Q93454-F1-model_v4 65 437 5 363 0.5809 0.6669
AF-O60907-F1-model_v4 1 437 39 577 0.5693 0.6585
AF-Q8BIA4-F1-model_v4 73 437 198 562 0.5501 0.7581
AF-Q9FE91-F1-model_v4 28 437 9 415 0.5298 0.5743
Download Full SwissProt Results