dbCAN Logo

Cluster: Rep_254_CGC29

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_254_c_209 Rep_254_c_209_20 24148 25428 + PL10_1
sulfatase Rep_254_c_209 Rep_254_c_209_21 25505 26785 + S1_16
NULL(UNKNOWN) Rep_254_c_209 Rep_254_c_209_22 27211 27624 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_254_c_209 Rep_254_c_209_23 27621 29786 - CE12
TF Rep_254_c_209 Rep_254_c_209_24 29913 32291 - HTH_AraC
NULL(UNKNOWN) Rep_254_c_209 Rep_254_c_209_25 32305 32931 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_254_c_209 Rep_254_c_209_26 32972 34036 - PL1_2
TC Rep_254_c_209 Rep_254_c_209_27 34367 34567 + 1.A.23.4.5
Gene ID: Rep_254_c_209_20
Type: CAZyme
Location: 24148 - 25428 (+)
Gene ID: Rep_254_c_209_21
Type: sulfatase
Location: 25505 - 26785 (+)
Gene ID: Rep_254_c_209_22
Type:
Location: 27211 - 27624 (-)
Gene ID: Rep_254_c_209_23
Type: CAZyme
Location: 27621 - 29786 (-)
Gene ID: Rep_254_c_209_24
Type: TF
Location: 29913 - 32291 (-)
Gene ID: Rep_254_c_209_25
Type:
Location: 32305 - 32931 (-)
Gene ID: Rep_254_c_209_26
Type: CAZyme
Location: 32972 - 34036 (-)
Gene ID: Rep_254_c_209_27
Type: TC
Location: 34367 - 34567 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Prevotella
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List