Cluster: Rep_253_CGC11
🧬 Cluster Details
- Gene Count: 18
- CAZyme Count: 6
- Substrate:
- Genome ID: Rep_253
- CGC Family ID: CGCFAM_06932
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_253_c_6 | Rep_253_c_6_18 | 19473 | 20816 | - | GH37 |
| pfam | Rep_253_c_6 | Rep_253_c_6_19 | 20829 | 21662 | - | DUF4886 |
| CAZyme | Rep_253_c_6 | Rep_253_c_6_20 | 21738 | 23120 | - | GH29 |
| CAZyme | Rep_253_c_6 | Rep_253_c_6_21 | 23163 | 25655 | - | GH97 |
| pfam | Rep_253_c_6 | Rep_253_c_6_22 | 25766 | 27163 | - | DUF4832 |
| pfam | Rep_253_c_6 | Rep_253_c_6_23 | 27327 | 28697 | - | DUF285 | DUF285 | DUF285 |
| TC | Rep_253_c_6 | Rep_253_c_6_24 | 28714 | 30528 | - | 8.A.46.1.5 |
| TC | Rep_253_c_6 | Rep_253_c_6_25 | 30540 | 33968 | - | 1.B.14.6.1 |
| STP | Rep_253_c_6 | Rep_253_c_6_26 | 34091 | 35299 | - | FecR |
| NULL(UNKNOWN) | Rep_253_c_6 | Rep_253_c_6_27 | 35417 | 36313 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_253_c_6 | Rep_253_c_6_28 | 36855 | 38579 | - | GH13_44 |
| TC | Rep_253_c_6 | Rep_253_c_6_29 | 38789 | 41059 | + | 3.A.11.3.1 |
| pfam | Rep_253_c_6 | Rep_253_c_6_30 | 41220 | 42254 | - | Ldh_1_N | Ldh_1_C |
| CAZyme | Rep_253_c_6 | Rep_253_c_6_31 | 42542 | 43534 | - | GH43_5 |
| CAZyme | Rep_253_c_6 | Rep_253_c_6_32 | 43554 | 45764 | - | GH43_4 |
| NULL(UNKNOWN) | Rep_253_c_6 | Rep_253_c_6_33 | 45865 | 47739 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | Rep_253_c_6 | Rep_253_c_6_34 | 47821 | 49620 | - | SusD_RagB | SusD-like_3 |
| TC | Rep_253_c_6 | Rep_253_c_6_35 | 49662 | 52877 | - | 1.B.14.6.1 |
Gene ID: Rep_253_c_6_18
Type: CAZyme
Location: 19473 - 20816 (-)
Type: CAZyme
Location: 19473 - 20816 (-)
Gene ID: Rep_253_c_6_19
Type: pfam
Location: 20829 - 21662 (-)
Type: pfam
Location: 20829 - 21662 (-)
Gene ID: Rep_253_c_6_20
Type: CAZyme
Location: 21738 - 23120 (-)
Type: CAZyme
Location: 21738 - 23120 (-)
Gene ID: Rep_253_c_6_21
Type: CAZyme
Location: 23163 - 25655 (-)
Type: CAZyme
Location: 23163 - 25655 (-)
Gene ID: Rep_253_c_6_22
Type: pfam
Location: 25766 - 27163 (-)
Type: pfam
Location: 25766 - 27163 (-)
Gene ID: Rep_253_c_6_23
Type: pfam
Location: 27327 - 28697 (-)
Type: pfam
Location: 27327 - 28697 (-)
Gene ID: Rep_253_c_6_24
Type: TC
Location: 28714 - 30528 (-)
Type: TC
Location: 28714 - 30528 (-)
Gene ID: Rep_253_c_6_25
Type: TC
Location: 30540 - 33968 (-)
Type: TC
Location: 30540 - 33968 (-)
Gene ID: Rep_253_c_6_26
Type: STP
Location: 34091 - 35299 (-)
Type: STP
Location: 34091 - 35299 (-)
Gene ID: Rep_253_c_6_27
Type:
Location: 35417 - 36313 (-)
Type:
Location: 35417 - 36313 (-)
Gene ID: Rep_253_c_6_28
Type: CAZyme
Location: 36855 - 38579 (-)
Type: CAZyme
Location: 36855 - 38579 (-)
Gene ID: Rep_253_c_6_29
Type: TC
Location: 38789 - 41059 (+)
Type: TC
Location: 38789 - 41059 (+)
Gene ID: Rep_253_c_6_30
Type: pfam
Location: 41220 - 42254 (-)
Type: pfam
Location: 41220 - 42254 (-)
Gene ID: Rep_253_c_6_31
Type: CAZyme
Location: 42542 - 43534 (-)
Type: CAZyme
Location: 42542 - 43534 (-)
Gene ID: Rep_253_c_6_32
Type: CAZyme
Location: 43554 - 45764 (-)
Type: CAZyme
Location: 43554 - 45764 (-)
Gene ID: Rep_253_c_6_33
Type:
Location: 45865 - 47739 (-)
Type:
Location: 45865 - 47739 (-)
Gene ID: Rep_253_c_6_34
Type: pfam
Location: 47821 - 49620 (-)
Type: pfam
Location: 47821 - 49620 (-)
Gene ID: Rep_253_c_6_35
Type: TC
Location: 49662 - 52877 (-)
Type: TC
Location: 49662 - 52877 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella multisaccharivorax
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.