PROTEIN: Rep_253_c_6_27
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Protein File & Metadata
Source:
Rep_253_c_6_27.pdb
Genome ID:
Protein ID:
Rep_253_c_6_27
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Protein Sequence
MKKLFTCLIM LLAFFSAGQA RVLWTGEQTY FNGRAQPKAD HRITLKAEDF AGIVAGDRLV 60 FYFTNYADDP ITSQHIIRLS TPLTYAPMGH NINVSEGDRK ASVFIDDVLK EKLTTVGLVI 120 GGTGFTLSSI SVEPASEILW EGLKVINNTG WTVGVLESYL FANVKEGDVL FLSVEQTSEG 180 AECVLKERST WKNLHSAVPN GNSFRDFKSD GVSLFSFSLD ADAVTSLKTH GMLVAGSKYN 240 LLSVALGSPT PSRIQQRESN TLEQKPVYNL NGVKVADKWR TDLPKGIYVV NGRKFLTR 298
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A250KI00-F1-model_v4 | CBM72 , GH16 | 12 | 255 | 27 | 613 | 0.5013 |
0.8352 |
| AF-A0A1B1I6K9-F1-model_v4 | CBM72 , GH16 | 12 | 253 | 27 | 611 | 0.5011 |
0.8421 |
| A0A930JAT3 | CBM72 , GH16 | 13 | 263 | 29 | 652 | 0.4974 |
0.8149 |
| AF-A0A2K9H5P1-F1-model_v4 | CBM72 , GH16 | 12 | 263 | 34 | 655 | 0.4863 |
0.7913 |
| AF-A0A1B1I5S0-F1-model_v4 | CBM72 , GH16 | 14 | 292 | 34 | 669 | 0.4861 |
0.7219 |
| AF-A0A250KEY0-F1-model_v4 | CBM72 , GH16 | 12 | 251 | 27 | 620 | 0.4822 |
0.82 |
| G6AHL1 | CBM72 , GH0 | 12 | 255 | 27 | 625 | 0.4741 |
0.7929 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A250KI00 | CBM72 , GH16 | 12 | 255 | 27 | 613 | 0.5013 |
0.8352 |
| A0A930JAT3 | CBM72 , GH16 | 13 | 263 | 29 | 652 | 0.4974 |
0.8149 |
| G6AHL1 | CBM72 , GH0 | 12 | 255 | 27 | 625 | 0.4741 |
0.7929 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.