Cluster: Rep_2519_CGC20
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 4
- Substrate:
- Genome ID: Rep_2519
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2519_c_53 | Rep_2519_c_53_3 | 2086 | 3405 | + | GH4 |
| NULL(UNKNOWN) | Rep_2519_c_53 | Rep_2519_c_53_4 | 3454 | 4335 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TF | Rep_2519_c_53 | Rep_2519_c_53_5 | 4448 | 5206 | + | HTH_AraC |
| CAZyme | Rep_2519_c_53 | Rep_2519_c_53_6 | 5318 | 7180 | + | GH151 |
| pfam | Rep_2519_c_53 | Rep_2519_c_53_7 | 7312 | 8376 | + | PHP | PHP_C |
| TC | Rep_2519_c_53 | Rep_2519_c_53_8 | 8376 | 9707 | + | 2.A.66.1.34 |
| CAZyme | Rep_2519_c_53 | Rep_2519_c_53_9 | 9818 | 11986 | - | GH16_14 |
| CAZyme | Rep_2519_c_53 | Rep_2519_c_53_10 | 12063 | 12968 | - | CE4 |
Gene ID: Rep_2519_c_53_3
Type: CAZyme
Location: 2086 - 3405 (+)
Type: CAZyme
Location: 2086 - 3405 (+)
Gene ID: Rep_2519_c_53_4
Type:
Location: 3454 - 4335 (-)
Type:
Location: 3454 - 4335 (-)
Gene ID: Rep_2519_c_53_5
Type: TF
Location: 4448 - 5206 (+)
Type: TF
Location: 4448 - 5206 (+)
Gene ID: Rep_2519_c_53_6
Type: CAZyme
Location: 5318 - 7180 (+)
Type: CAZyme
Location: 5318 - 7180 (+)
Gene ID: Rep_2519_c_53_7
Type: pfam
Location: 7312 - 8376 (+)
Type: pfam
Location: 7312 - 8376 (+)
Gene ID: Rep_2519_c_53_8
Type: TC
Location: 8376 - 9707 (+)
Type: TC
Location: 8376 - 9707 (+)
Gene ID: Rep_2519_c_53_9
Type: CAZyme
Location: 9818 - 11986 (-)
Type: CAZyme
Location: 9818 - 11986 (-)
Gene ID: Rep_2519_c_53_10
Type: CAZyme
Location: 12063 - 12968 (-)
Type: CAZyme
Location: 12063 - 12968 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
RGIG6154
Family
RGIG6154
Genus
RGIG6154
Species
RGIG6154 sp934457515
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.