PROTEIN: Rep_2519_c_53_4
Loading protein structure...
Loading protein structure...
Protein File & Metadata
Source:
Rep_2519_c_53_4.pdb
Genome ID:
Protein ID:
Rep_2519_c_53_4
Loading protein structure information...
Detailed structural information will appear here after analysis...
Protein Sequence
MGYFLLTVNL LIGTAGTMVF KNFQRGFPSD LPHKFLYLSI NGLFAVLYFA TMCKFSVSFH 60 IPTVIYAAVY ALFIAITLLL NLIIYKYLQM ATVSVIEDGA GFVIKTLVGA WIFSETITAG 120 GWAAFLFRLA AVIIPFRYVF RDKAKKIGVF LCLLATVVSC GSSFLIKAYM QDNRVLPPSH 180 CFFWLNVFLF AVCGVVFGIF CVKCKRQRQQ IPVFKAGQIG SIALITATSN IGSILNAYIF 240 KFMPLYLYSI LSGALGLIFV TIAARVFYKE KITKDVALSV ALSILAIICS AAF 293
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q5F951-F1-model_v4 | 3 | 293 | 1 | 282 | 0.8197 |
0.8691 |
| AF-P44170-F1-model_v4 | 3 | 293 | 1 | 287 | 0.8127 |
0.8494 |
| AF-Q9L6P1-F1-model_v4 | 1 | 293 | 7 | 286 | 0.8107 |
0.8697 |
| AF-A0A0H3GH61-F1-model_v4 | 1 | 293 | 7 | 286 | 0.8077 |
0.8703 |
| AF-Q329Z7-F1-model_v4 | 1 | 293 | 7 | 287 | 0.8075 |
0.8673 |
| AF-P27844-F1-model_v4 | 1 | 293 | 7 | 286 | 0.8067 |
0.8682 |
| AF-A0A0H3GYZ7-F1-model_v4 | 1 | 293 | 4 | 277 | 0.8052 |
0.8627 |
| AF-Q9I5Z7-F1-model_v4 | 1 | 292 | 2 | 276 | 0.7942 |
0.8492 |
| AF-Q8DPI5-F1-model_v4 | 1 | 293 | 9 | 296 | 0.7932 |
0.8377 |
| AF-Q8ZL13-F1-model_v4 | 1 | 293 | 13 | 286 | 0.7917 |
0.8602 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| WJH36882.1 | GH36 | 1 | 293 | 376 | 665 | 0.5853 |
0.8363 |
| AF-A0A3P6AF83-F1-model_v4 | GH28 | 1 | 293 | 450 | 766 | 0.5334 |
0.7857 |
| AF-A0A7H8KSK8-F1-model_v4 | GT51 | 1 | 293 | 820 | 1110 | 0.4915 |
0.7919 |
| AF-A0A4D6KI88-F1-model_v4 | GH1 | 1 | 293 | 97 | 414 | 0.469 |
0.7253 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| WJH36882.1 | GH36 | 1 | 293 | 376 | 665 | 0.5853 |
0.8363 |
| A0A3P6AF83 | GH28 | 1 | 293 | 450 | 766 | 0.5334 |
0.7857 |
| A0A7H8KSK8 | GT51 | 1 | 293 | 820 | 1110 | 0.4915 |
0.7919 |
| A0A4D6KI88 | GH1 | 1 | 293 | 97 | 414 | 0.469 |
0.7253 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 7paf-assembly1.cif.gz_D | 1 | 291 | 1 | 278 | 0.8128 |
0.8589 |
| 6qsk-assembly2.cif.gz_G-2 | 1 | 293 | 3 | 290 | 0.783 |
0.8303 |
| 5ogk-assembly1.cif.gz_B | 1 | 293 | 2 | 292 | 0.7818 |
0.8227 |
| 6qsk-assembly1.cif.gz_A | 1 | 293 | 2 | 286 | 0.7798 |
0.83 |
| 5ogk-assembly2.cif.gz_C | 1 | 293 | 3 | 289 | 0.7776 |
0.825 |
| 5ogk-assembly1.cif.gz_A | 1 | 293 | 2 | 286 | 0.775 |
0.8256 |
| 5oge-assembly3.cif.gz_H-2 | 1 | 293 | 5 | 294 | 0.7745 |
0.8204 |
| 5oge-assembly2.cif.gz_B | 1 | 293 | 5 | 294 | 0.7744 |
0.8199 |
| 5oge-assembly1.cif.gz_A | 1 | 293 | 5 | 294 | 0.7744 |
0.8206 |
| 5oge-assembly3.cif.gz_C | 1 | 293 | 5 | 297 | 0.773 |
0.8144 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P44170-F1-model_v4 | 3 | 293 | 1 | 287 | 0.8127 |
0.8494 |
| AF-Q9L6P1-F1-model_v4 | 1 | 293 | 7 | 286 | 0.8107 |
0.8697 |
| AF-Q8Z3B1-F1-model_v4 | 1 | 293 | 7 | 286 | 0.8101 |
0.8691 |
| AF-P27844-F1-model_v4 | 1 | 293 | 7 | 286 | 0.8067 |
0.8682 |
| AF-Q4UNE6-F1-model_v4 | 1 | 293 | 10 | 282 | 0.7993 |
0.8786 |
| AF-Q9I633-F1-model_v4 | 1 | 293 | 7 | 286 | 0.7982 |
0.8622 |
| AF-O31859-F1-model_v4 | 1 | 293 | 7 | 287 | 0.796 |
0.8572 |
| AF-O34416-F1-model_v4 | 1 | 293 | 1 | 286 | 0.7856 |
0.8299 |
| AF-O29740-F1-model_v4 | 1 | 293 | 1 | 287 | 0.7849 |
0.8244 |
| AF-O68827-F1-model_v4 | 1 | 293 | 5 | 290 | 0.7826 |
0.8305 |