Cluster: Rep_2519_CGC12
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: Rep_2519
- CGC Family ID: CGCFAM_07926
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2519_c_15 | Rep_2519_c_15_23 | 20259 | 21932 | - | GH123 |
| NULL(UNKNOWN) | Rep_2519_c_15 | Rep_2519_c_15_24 | 21929 | 23110 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | Rep_2519_c_15 | Rep_2519_c_15_25 | 23135 | 23545 | - | GtrA_DPMS_TM |
| CAZyme | Rep_2519_c_15 | Rep_2519_c_15_26 | 23542 | 24498 | - | GT2 |
| pfam | Rep_2519_c_15 | Rep_2519_c_15_27 | 24523 | 26466 | - | Glucos_trans_II |
| CAZyme | Rep_2519_c_15 | Rep_2519_c_15_28 | 26496 | 29309 | - | GT2 | GT2 |
| TC | Rep_2519_c_15 | Rep_2519_c_15_29 | 29313 | 30071 | - | 3.A.1.103.5 |
Gene ID: Rep_2519_c_15_23
Type: CAZyme
Location: 20259 - 21932 (-)
Type: CAZyme
Location: 20259 - 21932 (-)
Gene ID: Rep_2519_c_15_24
Type:
Location: 21929 - 23110 (-)
Type:
Location: 21929 - 23110 (-)
Gene ID: Rep_2519_c_15_25
Type: pfam
Location: 23135 - 23545 (-)
Type: pfam
Location: 23135 - 23545 (-)
Gene ID: Rep_2519_c_15_26
Type: CAZyme
Location: 23542 - 24498 (-)
Type: CAZyme
Location: 23542 - 24498 (-)
Gene ID: Rep_2519_c_15_27
Type: pfam
Location: 24523 - 26466 (-)
Type: pfam
Location: 24523 - 26466 (-)
Gene ID: Rep_2519_c_15_28
Type: CAZyme
Location: 26496 - 29309 (-)
Type: CAZyme
Location: 26496 - 29309 (-)
Gene ID: Rep_2519_c_15_29
Type: TC
Location: 29313 - 30071 (-)
Type: TC
Location: 29313 - 30071 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
RGIG6154
Family
RGIG6154
Genus
RGIG6154
Species
RGIG6154 sp934457515
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.