PROTEIN: Rep_2519_c_15_24
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Protein File & Metadata
Source:
Rep_2519_c_15_24.pdb
Genome ID:
Protein ID:
Rep_2519_c_15_24
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Protein Sequence
MIKAEKKVLE YIKLHMPLAV SVLFLTLGIV VRIKLRDVIS GDYAGFLFPW YEEIGAHGLS 60 QQVGDYNFLY QFMIWIFTKL QVYPLYAYKA VSCAFDFVLA FTGGLIAYEN TSQHKKWGGV 120 FAFCAIWLSP MVFLNSAAWA QCDAIYSAFA VLSLYFLLKQ KYTAAFILLG VSFTFKFHAV 180 FVLPFFLYIY FVKEEFSIAR FLTIPVVMCV LSAPLVFWGR NLLEIFVIYV KQTSSYQAMS 240 MNYPSAWLIL CKAMDAGQYF LLKAVAIIIT VFVLALLMLW WIRKNCEPSG KKFYFMAFLL 300 IYTCVLFLPS MHERYGYLYE ILAILLAVLI PKTIPLCVGL LCVSLNTYGA FLFGIPIQLS 360 LLSCVNIAVY MAYIFIFKRE FIQTNKYERD KKI 393
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A0J9Y3V0-F1-model_v4 | 3 | 392 | 1 | 403 | 0.7508 |
0.799 |
| AF-A0A077ZBX5-F1-model_v4 | 1 | 389 | 2 | 491 | 0.7316 |
0.8359 |
| AF-A0A0J9XRE5-F1-model_v4 | 6 | 389 | 13 | 526 | 0.7306 |
0.8735 |
| AF-Q9VKX7-F1-model_v4 | 17 | 385 | 1 | 475 | 0.7304 |
0.8611 |
| AF-I1LX18-F1-model_v4 | 9 | 391 | 14 | 507 | 0.7302 |
0.8582 |
| AF-A0A1D6K1R5-F1-model_v4 | 5 | 393 | 16 | 519 | 0.7276 |
0.8484 |
| AF-Q7XIE1-F1-model_v4 | 14 | 393 | 24 | 517 | 0.7244 |
0.8614 |
| AF-A0A0K0IZP2-F1-model_v4 | 11 | 386 | 3 | 486 | 0.7215 |
0.8542 |
| AF-A0A044UW34-F1-model_v4 | 7 | 385 | 15 | 527 | 0.7207 |
0.8738 |
| AF-Q12001-F1-model_v4 | 9 | 385 | 27 | 540 | 0.7188 |
0.8783 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A3S4UYC9-F1-model_v4 | GT87 | 9 | 393 | 5 | 417 | 0.7481 |
0.8124 |
| UJR26363.1 | GT57 | 15 | 392 | 1 | 487 | 0.7396 |
0.8632 |
| AF-F1KYR5-F1-model_v4 | GT57 | 12 | 393 | 16 | 499 | 0.7348 |
0.8571 |
| AF-F1L3G4-F1-model_v4 | GT57 | 12 | 393 | 16 | 499 | 0.7345 |
0.8569 |
| AF-Q9VKX7-F1-model_v4 | GT57 | 17 | 385 | 1 | 475 | 0.73 |
0.8607 |
| AF-B6U7P9-F1-model_v4 | GT57 | 1 | 393 | 12 | 519 | 0.7275 |
0.8405 |
| A0A834R6C9 | GT57 | 15 | 393 | 1 | 486 | 0.7268 |
0.8504 |
| AF-Q7XIE1-F1-model_v4 | GT57 | 14 | 393 | 24 | 517 | 0.7243 |
0.8613 |
| AF-A0A6F9D6W6-F1-model_v4 | GT57 | 12 | 392 | 6 | 510 | 0.7239 |
0.8531 |
| AF-A0A099P6A5-F1-model_v4 | GT57 | 9 | 389 | 28 | 533 | 0.7237 |
0.87 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A3S4UYC9 | GT87 | 9 | 393 | 5 | 417 | 0.7481 |
0.8124 |
| UJR26363.1 | GT57 | 15 | 392 | 1 | 487 | 0.7396 |
0.8632 |
| A0A7H0SNH2 | GT87 | 2 | 393 | 2 | 423 | 0.7395 |
0.7922 |
| A0A180G3B2 | GT58 | 13 | 393 | 20 | 420 | 0.7387 |
0.8089 |
| A0A0G3GQX7 | GT87 | 6 | 392 | 1 | 387 | 0.7363 |
0.7711 |
| F1KYR5 | GT57 | 12 | 393 | 16 | 499 | 0.7348 |
0.8571 |
| Q9VKX7 | GT57 | 17 | 385 | 1 | 475 | 0.73 |
0.8607 |
| A0A834R6C9 | GT57 | 15 | 393 | 1 | 486 | 0.7268 |
0.8504 |
| A0A6F9D6W6 | GT57 | 12 | 392 | 6 | 510 | 0.7239 |
0.8531 |
| A0A229TG27 | GT87 | 1 | 393 | 13 | 404 | 0.7209 |
0.7636 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q9VKX7-F1-model_v4 | 17 | 385 | 1 | 475 | 0.7304 |
0.8611 |
| AF-Q12001-F1-model_v4 | 9 | 385 | 27 | 540 | 0.7188 |
0.8783 |
| AF-Q3T1L5-F1-model_v4 | 14 | 392 | 1 | 506 | 0.7183 |
0.85 |
| AF-Q3TAE8-F1-model_v4 | 14 | 389 | 1 | 503 | 0.7178 |
0.8554 |
| AF-Q09226-F1-model_v4 | 9 | 389 | 37 | 502 | 0.7126 |
0.8367 |
| AF-Q9FF17-F1-model_v4 | 14 | 393 | 35 | 532 | 0.7108 |
0.8557 |