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Cluster: Rep_247_CGC35

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_247_c_32 Rep_247_c_32_19 27330 29072 + 9.B.174.1.1
pfam Rep_247_c_32 Rep_247_c_32_20 29077 30750 + DUF6377
TC Rep_247_c_32 Rep_247_c_32_21 30980 33982 + 1.B.14.6.1
TC Rep_247_c_32 Rep_247_c_32_22 33991 35481 + 8.A.46.1.3
pfam Rep_247_c_32 Rep_247_c_32_23 35521 37017 + SusE | SusF_SusE | SusF_SusE
CAZyme Rep_247_c_32 Rep_247_c_32_24 37065 38843 + GH66
CAZyme Rep_247_c_32 Rep_247_c_32_25 38891 41038 + GH97
Gene ID: Rep_247_c_32_19
Type: TC
Location: 27330 - 29072 (+)
Gene ID: Rep_247_c_32_20
Type: pfam
Location: 29077 - 30750 (+)
Gene ID: Rep_247_c_32_21
Type: TC
Location: 30980 - 33982 (+)
Gene ID: Rep_247_c_32_22
Type: TC
Location: 33991 - 35481 (+)
Gene ID: Rep_247_c_32_23
Type: pfam
Location: 35521 - 37017 (+)
Gene ID: Rep_247_c_32_24
Type: CAZyme
Location: 37065 - 38843 (+)
Gene ID: Rep_247_c_32_25
Type: CAZyme
Location: 38891 - 41038 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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