Cluster: Rep_247_CGC19
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_247
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_247_c_14 | Rep_247_c_14_3 | 2205 | 4280 | + | GH13_8 |
| pfam | Rep_247_c_14 | Rep_247_c_14_4 | 4337 | 5467 | + | DUF6057 |
| pfam | Rep_247_c_14 | Rep_247_c_14_5 | 5671 | 6648 | + | PFK |
| TC | Rep_247_c_14 | Rep_247_c_14_6 | 6840 | 8369 | + | 3.A.2.1.2 |
| pfam | Rep_247_c_14 | Rep_247_c_14_7 | 8411 | 8650 | + | ATP-synt_DE_N |
| NULL(UNKNOWN) | Rep_247_c_14 | Rep_247_c_14_8 | 8635 | 8910 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_247_c_14 | Rep_247_c_14_9 | 8923 | 9990 | + | 3.A.2.1.7 |
Gene ID: Rep_247_c_14_3
Type: CAZyme
Location: 2205 - 4280 (+)
Type: CAZyme
Location: 2205 - 4280 (+)
Gene ID: Rep_247_c_14_4
Type: pfam
Location: 4337 - 5467 (+)
Type: pfam
Location: 4337 - 5467 (+)
Gene ID: Rep_247_c_14_5
Type: pfam
Location: 5671 - 6648 (+)
Type: pfam
Location: 5671 - 6648 (+)
Gene ID: Rep_247_c_14_6
Type: TC
Location: 6840 - 8369 (+)
Type: TC
Location: 6840 - 8369 (+)
Gene ID: Rep_247_c_14_7
Type: pfam
Location: 8411 - 8650 (+)
Type: pfam
Location: 8411 - 8650 (+)
Gene ID: Rep_247_c_14_8
Type:
Location: 8635 - 8910 (+)
Type:
Location: 8635 - 8910 (+)
Gene ID: Rep_247_c_14_9
Type: TC
Location: 8923 - 9990 (+)
Type: TC
Location: 8923 - 9990 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella mizrahii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.