Cluster: Rep_247_CGC16
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_247
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_247_c_12 | Rep_247_c_12_51 | 55731 | 56921 | - | GT2 |
| pfam | Rep_247_c_12 | Rep_247_c_12_52 | 57003 | 58487 | - | Polysacc_synt | Polysacc_synt_3 |
| pfam | Rep_247_c_12 | Rep_247_c_12_53 | 58737 | 60140 | + | UPF0004 | TRAM | Radical_SAM |
| TC | Rep_247_c_12 | Rep_247_c_12_54 | 60214 | 62070 | + | 3.A.1.106.1 |
| sulfatase | Rep_247_c_12 | Rep_247_c_12_55 | 62188 | 64179 | + | S1_27 |
| pfam | Rep_247_c_12 | Rep_247_c_12_56 | 64176 | 65150 | + | Lip_A_acyltrans |
| CAZyme | Rep_247_c_12 | Rep_247_c_12_57 | 65220 | 66029 | + | GT11 |
Gene ID: Rep_247_c_12_51
Type: CAZyme
Location: 55731 - 56921 (-)
Type: CAZyme
Location: 55731 - 56921 (-)
Gene ID: Rep_247_c_12_52
Type: pfam
Location: 57003 - 58487 (-)
Type: pfam
Location: 57003 - 58487 (-)
Gene ID: Rep_247_c_12_53
Type: pfam
Location: 58737 - 60140 (+)
Type: pfam
Location: 58737 - 60140 (+)
Gene ID: Rep_247_c_12_54
Type: TC
Location: 60214 - 62070 (+)
Type: TC
Location: 60214 - 62070 (+)
Gene ID: Rep_247_c_12_55
Type: sulfatase
Location: 62188 - 64179 (+)
Type: sulfatase
Location: 62188 - 64179 (+)
Gene ID: Rep_247_c_12_56
Type: pfam
Location: 64176 - 65150 (+)
Type: pfam
Location: 64176 - 65150 (+)
Gene ID: Rep_247_c_12_57
Type: CAZyme
Location: 65220 - 66029 (+)
Type: CAZyme
Location: 65220 - 66029 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella mizrahii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.