Cluster: Rep_2406_CGC8
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2406
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2406_c_84 | Rep_2406_c_84_10 | 12068 | 12961 | + | 3.A.1.1.28 |
| TC | Rep_2406_c_84 | Rep_2406_c_84_11 | 12966 | 13847 | + | 3.A.1.1.7 |
| TC | Rep_2406_c_84 | Rep_2406_c_84_12 | 13913 | 15253 | - | 1.A.26.1.2 |
| CAZyme | Rep_2406_c_84 | Rep_2406_c_84_13 | 15382 | 17025 | - | GH13_5 |
Gene ID: Rep_2406_c_84_10
Type: TC
Location: 12068 - 12961 (+)
Type: TC
Location: 12068 - 12961 (+)
Gene ID: Rep_2406_c_84_11
Type: TC
Location: 12966 - 13847 (+)
Type: TC
Location: 12966 - 13847 (+)
Gene ID: Rep_2406_c_84_12
Type: TC
Location: 13913 - 15253 (-)
Type: TC
Location: 13913 - 15253 (-)
Gene ID: Rep_2406_c_84_13
Type: CAZyme
Location: 15382 - 17025 (-)
Type: CAZyme
Location: 15382 - 17025 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Porcincola
Species
Porcincola sp902800805
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.