Cluster: Rep_2406_CGC7
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2406
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2406_c_82 | Rep_2406_c_82_8 | 8993 | 11035 | + | GH120 |
| NULL(UNKNOWN) | Rep_2406_c_82 | Rep_2406_c_82_9 | 11781 | 12377 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_2406_c_82 | Rep_2406_c_82_10 | 12654 | 14375 | + | 2.A.114.1.3 |
| TC | Rep_2406_c_82 | Rep_2406_c_82_11 | 14751 | 15119 | + | 3.A.1.1.25 |
Gene ID: Rep_2406_c_82_8
Type: CAZyme
Location: 8993 - 11035 (+)
Type: CAZyme
Location: 8993 - 11035 (+)
Gene ID: Rep_2406_c_82_9
Type:
Location: 11781 - 12377 (+)
Type:
Location: 11781 - 12377 (+)
Gene ID: Rep_2406_c_82_10
Type: TC
Location: 12654 - 14375 (+)
Type: TC
Location: 12654 - 14375 (+)
Gene ID: Rep_2406_c_82_11
Type: TC
Location: 14751 - 15119 (+)
Type: TC
Location: 14751 - 15119 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Porcincola
Species
Porcincola sp902800805
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.