Cluster: Rep_2406_CGC30
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2406
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2406_c_218 | Rep_2406_c_218_8 | 8397 | 9383 | + | GH179 |
| pfam | Rep_2406_c_218 | Rep_2406_c_218_9 | 9541 | 10623 | - | Dala_Dala_lig_N | CPSase_L_D2 | Dala_Dala_lig_C |
| TC | Rep_2406_c_218 | Rep_2406_c_218_10 | 10786 | 12174 | - | 2.A.66.1.22 |
Gene ID: Rep_2406_c_218_8
Type: CAZyme
Location: 8397 - 9383 (+)
Type: CAZyme
Location: 8397 - 9383 (+)
Gene ID: Rep_2406_c_218_9
Type: pfam
Location: 9541 - 10623 (-)
Type: pfam
Location: 9541 - 10623 (-)
Gene ID: Rep_2406_c_218_10
Type: TC
Location: 10786 - 12174 (-)
Type: TC
Location: 10786 - 12174 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Porcincola
Species
Porcincola sp902800805
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.